RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 VAX2Q9UIW0 290 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 RPH3ALQ9UNE2 315 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 PSG8Q9UQ74 426 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 GOLT1BQ9Y3E0 138 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 KLF12Q9Y4X4 402 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 LENEPQ9Y5L5 61 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 U3KQK5 164 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 TRAV8-1A0A0A6YYK1 113 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 C7orf71A4D174 169 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 RBFOX3A6NFN3 312 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 SMIM9A6NGZ8 99 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 C11orf94C9JXX5 98 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 H7BYZ3 331 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 M0R2Z0 102 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 PEX7O00628 323 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 PDE6DO43924 150 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 NDUFS6O75380 124 aaKnown RBP2.19□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF324O75467 553 aaPredicted RBP2.19□□□□□ -2.06
VPS13B-209ENST00000521559 INSP01308 110 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 S100A9P06702 114 aaKnown RBP2.19□□□□□ -2.06
VPS13B-209ENST00000521559 GPX1P07203 203 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 BCL2P10415 239 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 RNASE4P34096 147 aaKnown RBP2.19□□□□□ -2.06
VPS13B-209ENST00000521559 AKR1C3P42330 323 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 CDKN1BP46527 198 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 TAS2R60P59551 318 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 RAB14P61106 215 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 CXCL6P80162 114 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 FLI1Q01543 452 aaPredicted RBP2.19□□□□□ -2.06
VPS13B-209ENST00000521559 IFITM2Q01629 132 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM183BQ1AE95 376 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 DEFB135Q30KP9 77 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 SAPCD1Q5SSQ6 148 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF705AQ6ZN79 300 aaPredicted RBP2.19□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF767PQ75MW2 155 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 PRNTQ86SH4 94 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM256Q8N2U0 113 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM75Q8N9X5 138 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 Q8TAT8 98 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 FMC1Q96HJ9 113 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 LINC01587Q99440 93 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 KIR2DL4Q99706 377 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 RARRES2Q99969 163 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 C20orf144Q9BQM9 153 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 NDFIP1Q9BT67 221 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 RETNQ9HD89 108 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 TREM1Q9NP99 234 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 ZFP30Q9Y2G7 519 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 TENM1Q9UKZ4 2725 aa2.19□□□□□ -2.06
VPS13B-209ENST00000521559 TRAV12-2A0A075B6T6 113 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 TRAV12-3A0A0B4J271 114 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 TRAV21A0A0B4J279 112 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 RAB19A4D1S5 217 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 FABP5P3A8MUU1 101 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF705GA8MUZ8 300 aaPredicted RBP2.18□□□□□ -2.06
VPS13B-209ENST00000521559 E9PLD3 99 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM250H0YL14 139 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 LTAP01374 205 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 SRP19P09132 144 aaKnown RBP2.18□□□□□ -2.06
VPS13B-209ENST00000521559 RBMY1A1P0DJD3 496 aaKnown RBP2.18□□□□□ -2.06
VPS13B-209ENST00000521559 RBMY1CP0DJD4 496 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 MIFP14174 115 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 RPL35P42766 123 aaKnown RBP2.18□□□□□ -2.06
VPS13B-209ENST00000521559 UBE2G1P62253 170 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 MEF2BQ02080 365 aaPredicted RBP2.18□□□□□ -2.06
VPS13B-209ENST00000521559 BTN1A1Q13410 526 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 PEA15Q15121 130 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 RBMY1FQ15415 496 aaKnown RBP2.18□□□□□ -2.06
VPS13B-209ENST00000521559 RRN3P1Q2M238 152 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 SMUG1Q53HV7 270 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 CLLU1Q5K131 121 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 Q6AWC8 147 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF493Q6ZR52 646 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 Q86TA4 180 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 BAGE2Q86Y30 109 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM183AQ8IXX5 376 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 FAM210AQ96ND0 272 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 LINC00467Q9BRT7 94 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 NIPSNAP3BQ9BS92 247 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM208Q9BTX3 173 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 EIF5A2Q9GZV4 153 aaKnown RBP2.18□□□□□ -2.06
VPS13B-209ENST00000521559 SMDT1Q9H4I9 107 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 MED9Q9NWA0 146 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 Q9UF83 564 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
VPS13B-209ENST00000521559 IGHV1OR15-1A0A075B7D0 117 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM189A5PLL7 270 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 C9JCJ5 164 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 C9JQL5 133 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 DEFB4AO15263 64 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 GCGP01275 180 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 PRM2P04554 102 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 PFN1P07737 140 aaKnown RBP2.17□□□□□ -2.06
VPS13B-209ENST00000521559 HTN1P15515 57 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 GNG4P50150 75 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 CRIP1P50238 77 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF80P51504 273 aaPredicted RBP2.17□□□□□ -2.06
VPS13B-209ENST00000521559 RPL32P62910 135 aaKnown RBP2.17□□□□□ -2.06
VPS13B-209ENST00000521559 DAZ2Q13117 558 aaKnown RBP2.17□□□□□ -2.06
VPS13B-209ENST00000521559 TDRG1Q3Y452 100 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms