RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 BAALCQ8WXS3 180 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 EPDR1Q9UM22 224 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 TNFSF18Q9UNG2 199 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 URGCP-MRPS24S4R325 110 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 RBFOX3A6NFN3 312 aa9.79□□□□□ -0.84
PRKDC-204ENST00000521331 GCHFRP30047 84 aa9.79□□□□□ -0.84
PRKDC-204ENST00000521331 SUMO1P63165 101 aaKnown RBP9.79□□□□□ -0.84
PRKDC-204ENST00000521331 RAB24Q969Q5 203 aa9.79□□□□□ -0.84
PRKDC-204ENST00000521331 LINC00479Q96M42 142 aa9.79□□□□□ -0.84
PRKDC-204ENST00000521331 TMEM167BQ9NRX6 74 aa9.79□□□□□ -0.84
PRKDC-204ENST00000521331 RAB19A4D1S5 217 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 BCL2L11O43521 198 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 MBP02144 154 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 ASIPP42127 132 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 UFSP1Q6NVU6 142 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 ALKAL2Q6UX46 152 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 SYT8Q8NBV8 401 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 STOML3Q8TAV4 291 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 CHAC1Q9BUX1 264 aa9.78□□□□□ -0.84
PRKDC-204ENST00000521331 FXYD6-FXYD2A0A087WZ82 144 aa9.77□□□□□ -0.85
PRKDC-204ENST00000521331 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
PRKDC-204ENST00000521331 RHODO00212 210 aa9.77□□□□□ -0.85
PRKDC-204ENST00000521331 LINC01620Q4KN68 170 aa9.77□□□□□ -0.85
PRKDC-204ENST00000521331 C10orf91Q5T1B1 145 aa9.77□□□□□ -0.85
PRKDC-204ENST00000521331 PSMG3Q9BT73 122 aaPredicted RBP9.77□□□□□ -0.85
PRKDC-204ENST00000521331 IL36BQ9NZH7 164 aa9.77□□□□□ -0.85
PRKDC-204ENST00000521331 IGKV2D-24A0A075B6R9 120 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 FABP5P3A8MUU1 101 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 TEX46H3BTG2 121 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 CXorf1O96002 111 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 NIT1Q86X76 327 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 C14orf178Q8N769 122 aaPredicted RBP9.76□□□□□ -0.85
PRKDC-204ENST00000521331 HSD17B11Q8NBQ5 300 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 SAMD10Q9BYL1 202 aa9.76□□□□□ -0.85
PRKDC-204ENST00000521331 OXTP01178 125 aa9.75□□□□□ -0.85
PRKDC-204ENST00000521331 SERF2P84101 59 aa9.75□□□□□ -0.85
PRKDC-204ENST00000521331 ELOBQ15370 118 aa9.75□□□□□ -0.85
PRKDC-204ENST00000521331 JPT2Q9H910 190 aa9.75□□□□□ -0.85
PRKDC-204ENST00000521331 Q9UF83 564 aa9.75□□□□□ -0.85
PRKDC-204ENST00000521331 A0A087WX48 190 aa9.74□□□□□ -0.85
PRKDC-204ENST00000521331 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
PRKDC-204ENST00000521331 B4DEV8 164 aa9.74□□□□□ -0.85
PRKDC-204ENST00000521331 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
PRKDC-204ENST00000521331 KCNIP4Q6PIL6 250 aa9.74□□□□□ -0.85
PRKDC-204ENST00000521331 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
PRKDC-204ENST00000521331 ACTR3CQ9C0K3 210 aaPredicted RBP9.74□□□□□ -0.85
PRKDC-204ENST00000521331 KLK12Q9UKR0 248 aa9.74□□□□□ -0.85
PRKDC-204ENST00000521331 ARL2-SNX15V9GYD0 113 aa9.74□□□□□ -0.85
PRKDC-204ENST00000521331 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
PRKDC-204ENST00000521331 KANTRA0A1W2PQU2 76 aa9.73□□□□□ -0.85
PRKDC-204ENST00000521331 H3BVH4 76 aa9.73□□□□□ -0.85
PRKDC-204ENST00000521331 ATP6V0CP27449 155 aa9.73□□□□□ -0.85
PRKDC-204ENST00000521331 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
PRKDC-204ENST00000521331 CLRN3Q8NCR9 226 aa9.73□□□□□ -0.85
PRKDC-204ENST00000521331 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
PRKDC-204ENST00000521331 CARHSP1Q9Y2V2 147 aaKnown RBP9.73□□□□□ -0.85
PRKDC-204ENST00000521331 LRP1Q07954 4544 aaKnown RBP9.73□□□□□ -0.85
PRKDC-204ENST00000521331 IGLV2-8P01709 118 aa9.72□□□□□ -0.85
PRKDC-204ENST00000521331 Q0VG73 95 aa9.72□□□□□ -0.85
PRKDC-204ENST00000521331 C14orf177Q52M58 125 aa9.72□□□□□ -0.85
PRKDC-204ENST00000521331 FAM74A4Q5TZK3 123 aa9.72□□□□□ -0.85
PRKDC-204ENST00000521331 ATRAIDQ6UW56 229 aa9.72□□□□□ -0.85
PRKDC-204ENST00000521331 ARMS2P0C7Q2 107 aa9.71□□□□□ -0.86
PRKDC-204ENST00000521331 Q86TA4 180 aa9.71□□□□□ -0.86
PRKDC-204ENST00000521331 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.86
PRKDC-204ENST00000521331 AQP10Q96PS8 301 aa9.71□□□□□ -0.86
PRKDC-204ENST00000521331 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
PRKDC-204ENST00000521331 TMEM218A2RU14 115 aa9.7□□□□□ -0.86
PRKDC-204ENST00000521331 PEX7O00628 323 aa9.7□□□□□ -0.86
PRKDC-204ENST00000521331 HIST1H2BAQ96A08 127 aa9.7□□□□□ -0.86
PRKDC-204ENST00000521331 SFRP2Q96HF1 295 aa9.7□□□□□ -0.86
PRKDC-204ENST00000521331 NKX6-2Q9C056 277 aaPredicted RBP9.7□□□□□ -0.86
PRKDC-204ENST00000521331 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
PRKDC-204ENST00000521331 A0A087WWL8 130 aa9.69□□□□□ -0.86
PRKDC-204ENST00000521331 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
PRKDC-204ENST00000521331 RPL36AP83881 106 aaKnown RBP9.69□□□□□ -0.86
PRKDC-204ENST00000521331 FAM162BQ5T6X4 162 aa9.69□□□□□ -0.86
PRKDC-204ENST00000521331 COX8CQ7Z4L0 72 aa9.69□□□□□ -0.86
PRKDC-204ENST00000521331 RPL36ALQ969Q0 106 aaKnown RBP9.69□□□□□ -0.86
PRKDC-204ENST00000521331 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
PRKDC-204ENST00000521331 CYTL1Q9NRR1 136 aa9.69□□□□□ -0.86
PRKDC-204ENST00000521331 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
PRKDC-204ENST00000521331 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 GRIFINA4D1Z8 144 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 M0R036 132 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 SH2D1AO60880 128 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 CRIP1P50238 77 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 UBE2D3P61077 147 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 UBE2D2P62837 147 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 ZFP82Q8N141 532 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 INO80EQ8NBZ0 244 aaPredicted RBP9.68□□□□□ -0.86
PRKDC-204ENST00000521331 ZC2HC1AQ96GY0 325 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
PRKDC-204ENST00000521331 CTXND1A0A1B0GTU2 59 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 TMEM262E9PQX1 116 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 M0R381 172 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 APOC3P02656 99 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 CRPP02741 224 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 UBE2G2P60604 165 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms