RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 DYNC1H1Q14204 4646 aaKnown RBP14.07□□□□□ -0.16
TRIM35-203ENST00000521253 C19orf71A6NCJ1 209 aa14.07□□□□□ -0.16
TRIM35-203ENST00000521253 RBFOX3A6NFN3 312 aa14.07□□□□□ -0.16
TRIM35-203ENST00000521253 OR5AL1P0C617 328 aa14.07□□□□□ -0.16
TRIM35-203ENST00000521253 DAZAP1Q96EP5 407 aaKnown RBP14.07□□□□□ -0.16
TRIM35-203ENST00000521253 Q9UF83 564 aa14.07□□□□□ -0.16
TRIM35-203ENST00000521253 LY96Q9Y6Y9 160 aa14.06□□□□□ -0.16
TRIM35-203ENST00000521253 MUC21A0A0G2JKD1 596 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 MUC21A0A140T8X8 626 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 GAGE12JA6NER3 117 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 LINC00694P0DN24 101 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 GZMBP10144 247 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 BTF3P20290 206 aaKnown RBP14.05□□□□□ -0.16
TRIM35-203ENST00000521253 LINC00315P59091 139 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 GAGE1Q13065 139 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 GAGE4Q13068 117 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 GAGE5Q13069 117 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 GAGE13Q4V321 117 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 OR2D3Q8NGH3 330 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 ATP6V0E2Q8NHE4 81 aa14.05□□□□□ -0.16
TRIM35-203ENST00000521253 DNAH10OSP0CZ25 163 aa14.04□□□□□ -0.16
TRIM35-203ENST00000521253 GTSF1LQ9H1H1 148 aa14.04□□□□□ -0.16
TRIM35-203ENST00000521253 TMEM250H0YL14 139 aa14.03□□□□□ -0.16
TRIM35-203ENST00000521253 P01737 135 aa14.03□□□□□ -0.16
TRIM35-203ENST00000521253 RPS20P60866 119 aaKnown RBP14.03□□□□□ -0.16
TRIM35-203ENST00000521253 SPANXN1Q5VSR9 72 aa14.03□□□□□ -0.16
TRIM35-203ENST00000521253 BIN3Q9NQY0 253 aa14.03□□□□□ -0.16
TRIM35-203ENST00000521253 SSTP61278 116 aa14.02□□□□□ -0.17
TRIM35-203ENST00000521253 TOR2AQ5JU69 321 aa14.02□□□□□ -0.17
TRIM35-203ENST00000521253 TRAV9-2A0A087WT02 112 aa14.01□□□□□ -0.17
TRIM35-203ENST00000521253 IGLC6P0CF74 106 aa14.01□□□□□ -0.17
TRIM35-203ENST00000521253 EVI2AP22794 236 aa14.01□□□□□ -0.17
TRIM35-203ENST00000521253 OR10J3Q5JRS4 329 aa14.01□□□□□ -0.17
TRIM35-203ENST00000521253 LELP1Q5T871 98 aa14.01□□□□□ -0.17
TRIM35-203ENST00000521253 OCC1Q8TAD7 63 aa14.01□□□□□ -0.17
TRIM35-203ENST00000521253 TPPP3Q9BW30 176 aa14.01□□□□□ -0.17
TRIM35-203ENST00000521253 TRAV8-6A0A0B4J262 113 aa14□□□□□ -0.17
TRIM35-203ENST00000521253 IGHV3-38A0A0C4DH36 116 aa14□□□□□ -0.17
TRIM35-203ENST00000521253 K7EN84 100 aa14□□□□□ -0.17
TRIM35-203ENST00000521253 FER1L6-AS1Q8NA97 138 aa14□□□□□ -0.17
TRIM35-203ENST00000521253 NUDT10Q8NFP7 164 aa14□□□□□ -0.17
TRIM35-203ENST00000521253 NUDT11Q96G61 164 aa14□□□□□ -0.17
TRIM35-203ENST00000521253 TNFRSF18Q9Y5U5 241 aa14□□□□□ -0.17
TRIM35-203ENST00000521253 XKRY2A2RUG3 117 aa13.99□□□□□ -0.17
TRIM35-203ENST00000521253 K7EP13 123 aa13.99□□□□□ -0.17
TRIM35-203ENST00000521253 Q6ZRN7 208 aaPredicted RBP13.99□□□□□ -0.17
TRIM35-203ENST00000521253 EIF5A2Q9GZV4 153 aaKnown RBP13.99□□□□□ -0.17
TRIM35-203ENST00000521253 TRBV10-1A0A0K0K1A3 114 aa13.98□□□□□ -0.17
TRIM35-203ENST00000521253 CEBPGP53567 150 aa13.98□□□□□ -0.17
TRIM35-203ENST00000521253 RAB4BP61018 213 aa13.98□□□□□ -0.17
TRIM35-203ENST00000521253 ZNF56Q15929 161 aa13.98□□□□□ -0.17
TRIM35-203ENST00000521253 LINC01556Q5JQF7 62 aa13.98□□□□□ -0.17
TRIM35-203ENST00000521253 FAM210AQ96ND0 272 aa13.98□□□□□ -0.17
TRIM35-203ENST00000521253 RNASE7Q9H1E1 156 aaKnown RBP13.98□□□□□ -0.17
TRIM35-203ENST00000521253 KIAA1109Q2LD37 5005 aa13.98□□□□□ -0.17
TRIM35-203ENST00000521253 AP1S3Q96PC3 154 aa13.97□□□□□ -0.17
TRIM35-203ENST00000521253 KIF25-AS1Q9Y6Z4 181 aa13.97□□□□□ -0.17
TRIM35-203ENST00000521253 TEX261Q6UWH6 196 aa13.96□□□□□ -0.17
TRIM35-203ENST00000521253 C10orf126Q8N4M7 172 aa13.96□□□□□ -0.17
TRIM35-203ENST00000521253 RPP21Q9H633 154 aaKnown RBP13.96□□□□□ -0.17
TRIM35-203ENST00000521253 MSRB1Q9NZV6 116 aa13.96□□□□□ -0.17
TRIM35-203ENST00000521253 NDUFS6O75380 124 aaKnown RBP13.95□□□□□ -0.18
TRIM35-203ENST00000521253 CACNG7P62955 275 aa13.95□□□□□ -0.18
TRIM35-203ENST00000521253 LYZL1Q6UWQ5 148 aa13.95□□□□□ -0.18
TRIM35-203ENST00000521253 NFE4Q86UQ8 179 aa13.95□□□□□ -0.18
TRIM35-203ENST00000521253 HERC2O95714 4834 aa13.95□□□□□ -0.18
TRIM35-203ENST00000521253 F2Z2F3 143 aa13.94□□□□□ -0.18
TRIM35-203ENST00000521253 F5H697 171 aa13.94□□□□□ -0.18
TRIM35-203ENST00000521253 SMIM17P0DL12 118 aa13.94□□□□□ -0.18
TRIM35-203ENST00000521253 RPL36AP83881 106 aaKnown RBP13.94□□□□□ -0.18
TRIM35-203ENST00000521253 OR10G8Q8NGN5 311 aa13.94□□□□□ -0.18
TRIM35-203ENST00000521253 RPL36ALQ969Q0 106 aaKnown RBP13.94□□□□□ -0.18
TRIM35-203ENST00000521253 TRBV7-3A0A075B6L6 115 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 A0A087WWC5 75 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 IGHV3-30P01768 117 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 IGHV3-33P01772 117 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 SRP19P09132 144 aaKnown RBP13.93□□□□□ -0.18
TRIM35-203ENST00000521253 IGHV3-30-3P0DP02 117 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 IGHV3-30-5P0DP03 117 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 UBE2D3P61077 147 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 UBE2D2P62837 147 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 NEXN-AS1Q8NBZ9 246 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 SMIM7Q9BQ49 75 aa13.93□□□□□ -0.18
TRIM35-203ENST00000521253 CTRLP40313 264 aa13.92□□□□□ -0.18
TRIM35-203ENST00000521253 Q8N3U1 123 aa13.92□□□□□ -0.18
TRIM35-203ENST00000521253 LRP1BQ9NZR2 4599 aa13.91□□□□□ -0.18
TRIM35-203ENST00000521253 IBA57-AS1B1ANH7 110 aa13.9□□□□□ -0.18
TRIM35-203ENST00000521253 NTF3P20783 257 aa13.9□□□□□ -0.18
TRIM35-203ENST00000521253 FAM231DQ6ZW35 169 aa13.9□□□□□ -0.18
TRIM35-203ENST00000521253 SPATA12Q7Z6I5 190 aa13.9□□□□□ -0.18
TRIM35-203ENST00000521253 ZNF727A8MUV8 499 aa13.89□□□□□ -0.19
TRIM35-203ENST00000521253 GATCO43716 136 aaKnown RBP13.89□□□□□ -0.19
TRIM35-203ENST00000521253 MGPP08493 103 aa13.89□□□□□ -0.19
TRIM35-203ENST00000521253 WDR73Q6P4I2 378 aa13.89□□□□□ -0.19
TRIM35-203ENST00000521253 LINC01551Q86U37 167 aa13.89□□□□□ -0.19
TRIM35-203ENST00000521253 GTSF1Q8WW33 167 aa13.89□□□□□ -0.19
TRIM35-203ENST00000521253 CNFNQ9BYD5 112 aa13.89□□□□□ -0.19
TRIM35-203ENST00000521253 C16orf90A8MZG2 172 aa13.88□□□□□ -0.19
TRIM35-203ENST00000521253 TRGC1P0CF51 173 aa13.88□□□□□ -0.19
TRIM35-203ENST00000521253 ERVFC1-1P60608 527 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms