RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TRBV12-3P01733 135 aa13.82□□□□□ -0.2
SDC2-202ENST00000518385 IGHV3-11P01762 117 aa13.82□□□□□ -0.2
SDC2-202ENST00000518385 ERCC8Q13216 396 aa13.82□□□□□ -0.2
SDC2-202ENST00000518385 C8orf86Q6ZUL3 223 aa13.82□□□□□ -0.2
SDC2-202ENST00000518385 NAA38Q9BRA0 125 aaKnown RBP13.82□□□□□ -0.2
SDC2-202ENST00000518385 VCX2Q9H322 139 aa13.82□□□□□ -0.2
SDC2-202ENST00000518385 HLA-DMBP28068 263 aa13.81□□□□□ -0.2
SDC2-202ENST00000518385 LCNL1Q6ZST4 164 aa13.81□□□□□ -0.2
SDC2-202ENST00000518385 Q8N2B8 174 aa13.81□□□□□ -0.2
SDC2-202ENST00000518385 FLNBO75369 2602 aaKnown RBP13.81□□□□□ -0.2
SDC2-202ENST00000518385 PRAC2D3DTV9 90 aa13.8□□□□□ -0.2
SDC2-202ENST00000518385 OVOL1O14753 267 aa13.8□□□□□ -0.2
SDC2-202ENST00000518385 UNQ9165/PRO28630Q6UXU0 137 aa13.8□□□□□ -0.2
SDC2-202ENST00000518385 RNF152Q8N8N0 203 aa13.8□□□□□ -0.2
SDC2-202ENST00000518385 ZNF702PQ9H963 129 aa13.8□□□□□ -0.2
SDC2-202ENST00000518385 DAZ1Q9NQZ3 744 aaKnown RBP13.8□□□□□ -0.2
SDC2-202ENST00000518385 TRAV8-2A0A0B4J237 113 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 IGHV3-66A0A0C4DH42 116 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 GAGE13Q4V321 117 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 DPH3P1Q9H4G8 78 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 UFC1Q9Y3C8 167 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 TRAV21A0A0B4J279 112 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 SRD5A1P18405 259 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 TM4SF20Q53R12 229 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 NEXN-AS1Q8NBZ9 246 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 C16orf92Q96LL3 132 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 DUX5Q96PT3 197 aa13.79□□□□□ -0.2
SDC2-202ENST00000518385 IGHV3OR16-13A0A075B7E8 117 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 IGHV3-74A0A0B4J1X5 117 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 GAGE12HA6NDE8 117 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 DNAJC9-AS1A6NH13 148 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 SUMO2P61956 95 aaKnown RBP13.78□□□□□ -0.2
SDC2-202ENST00000518385 TMEM95Q3KNT9 176 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 SCGB3A1Q96QR1 104 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 C11orf21Q9P2W6 132 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 BAHCC1Q9P281 2608 aa13.78□□□□□ -0.2
SDC2-202ENST00000518385 ANK3Q12955 4377 aaKnown RBP13.77□□□□□ -0.2
SDC2-202ENST00000518385 IGHV3-49A0A0A0MS15 119 aa13.77□□□□□ -0.21
SDC2-202ENST00000518385 A0A1B0GV72 72 aa13.77□□□□□ -0.21
SDC2-202ENST00000518385 GAS8-AS1O95177 125 aa13.77□□□□□ -0.21
SDC2-202ENST00000518385 GATA1P15976 413 aaPredicted RBP13.77□□□□□ -0.21
SDC2-202ENST00000518385 TCTAP57738 103 aa13.77□□□□□ -0.21
SDC2-202ENST00000518385 POM121L12Q8N7R1 296 aa13.77□□□□□ -0.21
SDC2-202ENST00000518385 UBE2E2Q96LR5 201 aa13.77□□□□□ -0.21
SDC2-202ENST00000518385 IGFL4Q6B9Z1 124 aa13.76□□□□□ -0.21
SDC2-202ENST00000518385 MTURNQ8N3F0 131 aa13.76□□□□□ -0.21
SDC2-202ENST00000518385 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
SDC2-202ENST00000518385 ESM1Q9NQ30 184 aa13.76□□□□□ -0.21
SDC2-202ENST00000518385 HIVEP2P31629 2446 aa13.76□□□□□ -0.21
SDC2-202ENST00000518385 K7ERJ3 54 aa13.75□□□□□ -0.21
SDC2-202ENST00000518385 LGALS1P09382 135 aaKnown RBP13.75□□□□□ -0.21
SDC2-202ENST00000518385 HERVK_113P61574 105 aa13.75□□□□□ -0.21
SDC2-202ENST00000518385 RHPN1-AS1Q9BWJ2 59 aa13.75□□□□□ -0.21
SDC2-202ENST00000518385 ASIPP42127 132 aa13.75□□□□□ -0.21
SDC2-202ENST00000518385 APRG1Q8IVJ8 170 aa13.75□□□□□ -0.21
SDC2-202ENST00000518385 RNF182Q8N6D2 247 aa13.75□□□□□ -0.21
SDC2-202ENST00000518385 ZNF418Q8TF45 676 aaPredicted RBP13.75□□□□□ -0.21
SDC2-202ENST00000518385 LGALS9O00182 355 aa13.74□□□□□ -0.21
SDC2-202ENST00000518385 SOCS3O14543 225 aa13.74□□□□□ -0.21
SDC2-202ENST00000518385 PRO0461Q9UI25 63 aa13.74□□□□□ -0.21
SDC2-202ENST00000518385 H3BMG7 143 aa13.73□□□□□ -0.21
SDC2-202ENST00000518385 AZU1P20160 251 aa13.73□□□□□ -0.21
SDC2-202ENST00000518385 TCTEX1D4Q5JR98 221 aa13.73□□□□□ -0.21
SDC2-202ENST00000518385 OR10J6PQ8NGY7 276 aa13.73□□□□□ -0.21
SDC2-202ENST00000518385 DLX4Q92988 240 aaPredicted RBP13.73□□□□□ -0.21
SDC2-202ENST00000518385 TTTY13Q9BZ97 58 aa13.73□□□□□ -0.21
SDC2-202ENST00000518385 INAFM1C9JVW0 142 aa13.72□□□□□ -0.21
SDC2-202ENST00000518385 NXPH4O95158 308 aa13.72□□□□□ -0.21
SDC2-202ENST00000518385 TSSC4Q9Y5U2 329 aaPredicted RBP13.72□□□□□ -0.21
SDC2-202ENST00000518385 RNASE1P07998 156 aaKnown RBP13.71□□□□□ -0.21
SDC2-202ENST00000518385 HILS1P60008 231 aa13.71□□□□□ -0.21
SDC2-202ENST00000518385 WFDC2Q14508 124 aa13.71□□□□□ -0.21
SDC2-202ENST00000518385 TMEM141Q96I45 108 aa13.71□□□□□ -0.21
SDC2-202ENST00000518385 TRBV20-1A0A075B6N2 111 aa13.71□□□□□ -0.22
SDC2-202ENST00000518385 H3BVH4 76 aa13.71□□□□□ -0.22
SDC2-202ENST00000518385 ID1P41134 155 aa13.71□□□□□ -0.22
SDC2-202ENST00000518385 UBE2D1P51668 147 aa13.71□□□□□ -0.22
SDC2-202ENST00000518385 RASL10AQ92737 203 aa13.71□□□□□ -0.22
SDC2-202ENST00000518385 HIVEP1P15822 2718 aa13.7□□□□□ -0.22
SDC2-202ENST00000518385 IGHV4OR15-8A0A075B7B6 117 aa13.7□□□□□ -0.22
SDC2-202ENST00000518385 A0A087WW49 117 aa13.7□□□□□ -0.22
SDC2-202ENST00000518385 C2orf66Q6UXQ4 117 aa13.7□□□□□ -0.22
SDC2-202ENST00000518385 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
SDC2-202ENST00000518385 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
SDC2-202ENST00000518385 S100A4P26447 101 aaKnown RBP13.69□□□□□ -0.22
SDC2-202ENST00000518385 Q6ZSV7 163 aa13.69□□□□□ -0.22
SDC2-202ENST00000518385 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
SDC2-202ENST00000518385 FAM19A4Q96LR4 140 aa13.69□□□□□ -0.22
SDC2-202ENST00000518385 SPAG8Q99932 426 aaPredicted RBP13.69□□□□□ -0.22
SDC2-202ENST00000518385 C1QTNF4Q9BXJ3 329 aa13.69□□□□□ -0.22
SDC2-202ENST00000518385 CYSLTR1Q9Y271 337 aa13.69□□□□□ -0.22
SDC2-202ENST00000518385 PHLDA3Q9Y5J5 127 aa13.69□□□□□ -0.22
SDC2-202ENST00000518385 CYSRT1A8MQ03 144 aa13.68□□□□□ -0.22
SDC2-202ENST00000518385 M0QXV9 152 aa13.68□□□□□ -0.22
SDC2-202ENST00000518385 RPL11P62913 178 aaKnown RBP13.68□□□□□ -0.22
SDC2-202ENST00000518385 C10orf99Q6UWK7 81 aa13.68□□□□□ -0.22
SDC2-202ENST00000518385 ZFAND2AQ8N6M9 145 aa13.68□□□□□ -0.22
SDC2-202ENST00000518385 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
SDC2-202ENST00000518385 PRADC1Q9BSG0 188 aa13.68□□□□□ -0.22
SDC2-202ENST00000518385 MTORP42345 2549 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms