RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ARHGAP32A7KAX9 2087 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 SPRY2O43597 315 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 HCP5Q6MZN7 132 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 C16orf95Q9H693 158 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 PIFOQ8TCI5 191 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 FXYD5Q96DB9 178 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 LOXL1Q08397 574 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 C11orf44Q8N8P7 122 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 MYOZ3Q8TDC0 251 aa5.72□□□□□ -1.49
PDLIM5-219ENST00000514743 SPTA1P02549 2419 aa5.71□□□□□ -1.49
PDLIM5-219ENST00000514743 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 COX7A2P2O60397 106 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 LY6HO94772 140 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 CRIP2P52943 208 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 C10orf113Q5VZT2 155 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 ZNF329Q86UD4 541 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 LY6G5BQ8NDX9 201 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 FOXC2Q99958 501 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 ANKHD1Q8IWZ3 2542 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 SUB1P53999 127 aaKnown RBP eCLIP5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 CIRBPQ14011 172 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 IGF2RP11717 2491 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 ABCA4P78363 2273 aa5.71□□□□□ -1.5
PDLIM5-219ENST00000514743 LINC00305Q7Z4B0 112 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 MAPKAPK5-AS1Q8N8E1 139 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 CCDC140Q96MF4 163 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 AMMECR1Q9Y4X0 333 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 ZNF22P17026 224 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 RPL27AP46776 148 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 SYNJ2BPP57105 145 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 SS18Q15532 418 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 C11orf71Q6IPW1 123 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 PAXXQ9BUH6 204 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 PRSS22Q9GZN4 317 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 C7orf69Q9H7B7 122 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 AGRNO00468 2067 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 PAX4O43316 350 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 COX7A1P24310 79 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 FXYD7P58549 80 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 TMEM170BQ5T4T1 132 aa5.7□□□□□ -1.5
PDLIM5-219ENST00000514743 MED13LQ71F56 2210 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 HBDP02042 147 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 DAZ2Q13117 558 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 ORMDL2Q53FV1 153 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 DAZ4Q86SG3 579 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 PGLYRP4Q96LB8 373 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 DAZ1Q9NQZ3 744 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 DAZ3Q9NR90 486 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 LOC389332A0A1B0GUA5 103 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 GP9P14770 177 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 A0A096LNJ9 63 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 NCBP2LA6PVI3 153 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 I3L2K1 104 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 SRSF12Q8WXF0 261 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
PDLIM5-219ENST00000514743 UPK3BQ9BT76 320 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 A0A1W2PPR1 153 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 KNCNA6PVL3 124 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 ODF3BA8MYP8 253 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 IFI27P40305 119 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 UBE2E1P51965 193 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 HILS1P60008 231 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 SNRPD3P62318 126 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 FP248Q71RG6 208 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 LINC00643Q86TS7 51 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 C1orf158Q8N1D5 194 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 UBE2E2Q96LR5 201 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 ATRXP46100 2492 aa5.68□□□□□ -1.5
PDLIM5-219ENST00000514743 CELSR1Q9NYQ6 3014 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 UBE2D1P51668 147 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 APOC4P55056 127 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 C2orf82Q6UX34 121 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 LINC00322Q6ZN03 302 aaPredicted RBP5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 PRSS1P07477 247 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 TWIST1Q15672 202 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 RNF5Q99942 180 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 S4R3C0 116 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 NDUFA3O95167 84 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 IGF1P05019 195 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 CXCL5P42830 114 aa5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 RPL18AQ02543 176 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-219ENST00000514743 LINC01619G3V211 115 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 K7EIM0 57 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 IGHV4-39P01824 125 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 ATXN8Q156A1 80 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 CACNA1BQ00975 2339 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 IGKV1-17P01599 117 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 NDUFA11Q86Y39 141 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 DYNAPQ8N1N2 210 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 NPBQ8NG41 125 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 METTL26Q96S19 204 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 TRBV10-2A0A0K0K1G8 114 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 P0DMU3 169 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 FAM231AP0DMU4 169 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 FAM231CP0DMU5 169 aa5.66□□□□□ -1.5
PDLIM5-219ENST00000514743 C9orf139Q6ZV77 190 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms