RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 DPPA3Q6W0C5 159 aa7.22□□□□□ -1.25
RNF4-218ENST00000513284 DAZ4Q86SG3 579 aaKnown RBP7.22□□□□□ -1.25
RNF4-218ENST00000513284 INO80EQ8NBZ0 244 aaPredicted RBP7.22□□□□□ -1.25
RNF4-218ENST00000513284 NKX6-2Q9C056 277 aaPredicted RBP7.22□□□□□ -1.25
RNF4-218ENST00000513284 PARLQ9H300 379 aa7.22□□□□□ -1.25
RNF4-218ENST00000513284 DAZ3Q9NR90 486 aaKnown RBP7.22□□□□□ -1.25
RNF4-218ENST00000513284 BORCS7-ASMTA0A0B4J1R7 106 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 IFNA7P01567 189 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 ELOBQ15370 118 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 RGS21Q2M5E4 152 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 Q8N976 141 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 OR2T35Q8NGX2 323 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 IL36BQ9NZH7 164 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 C11orf21Q9P2W6 132 aa7.21□□□□□ -1.26
RNF4-218ENST00000513284 FXYD6-FXYD2A0A087WZ82 144 aa7.2□□□□□ -1.26
RNF4-218ENST00000513284 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
RNF4-218ENST00000513284 HIST1H2BAQ96A08 127 aa7.2□□□□□ -1.26
RNF4-218ENST00000513284 IGKV3D-20A0A0C4DH25 116 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 CTXND1A0A1B0GTU2 59 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 B4DEV8 164 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 PANO1I0J062 215 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 ZNF726P1Q15940 193 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.19□□□□□ -1.26
RNF4-218ENST00000513284 OR11H4Q8NGC9 324 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 CHCHD7Q9BUK0 85 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 ARL2-SNX15V9GYD0 113 aa7.19□□□□□ -1.26
RNF4-218ENST00000513284 A0A087WX48 190 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 PEX7O00628 323 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 TPT1P13693 172 aaKnown RBP7.18□□□□□ -1.26
RNF4-218ENST00000513284 UBE2G1P62253 170 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 AKR1C8PQ5T2L2 129 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 CYTL1Q9NRR1 136 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 ZFP30Q9Y2G7 519 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 PHLDA3Q9Y5J5 127 aa7.18□□□□□ -1.26
RNF4-218ENST00000513284 IGKV2D-24A0A075B6R9 120 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 TRAV34A0A0B4J273 112 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 TRBV10-1A0A0K0K1A3 114 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 H3BVH4 76 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 RPL36AP83881 106 aaKnown RBP7.17□□□□□ -1.26
RNF4-218ENST00000513284 Q0VG73 95 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 C14orf177Q52M58 125 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 DNLZQ5SXM8 178 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 FAM74A4Q5TZK3 123 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 Q86TA4 180 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 STOML3Q8TAV4 291 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 RPL36ALQ969Q0 106 aaKnown RBP7.17□□□□□ -1.26
RNF4-218ENST00000513284 FMC1Q96HJ9 113 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 TCEAL7Q9BRU2 100 aa7.17□□□□□ -1.26
RNF4-218ENST00000513284 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.17□□□□□ -1.26
RNF4-218ENST00000513284 ARPC5O15511 151 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 UBE2G2P60604 165 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 PKIAP61925 76 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 FAM162BQ5T6X4 162 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 DMRTA1Q5VZB9 504 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 NIT1Q86X76 327 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
RNF4-218ENST00000513284 MUC2Q02817 5179 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 SMLR1H3BR10 107 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 M0R036 132 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 CRPP02741 224 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 C14orf178Q8N769 122 aaPredicted RBP7.15□□□□□ -1.26
RNF4-218ENST00000513284 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 SAMD10Q9BYL1 202 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 Q9UF83 564 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 KLK12Q9UKR0 248 aa7.15□□□□□ -1.26
RNF4-218ENST00000513284 FAM74A7A6NL05 159 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 KRBOX1C9JBD0 128 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 M0R381 172 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 SH2D1AO60880 128 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 KRTAP10-8P60410 259 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 UFSP1Q6NVU6 142 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 COX8CQ7Z4L0 72 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 SFRP2Q96HF1 295 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 JPT2Q9H910 190 aa7.14□□□□□ -1.27
RNF4-218ENST00000513284 TRBV7-3A0A075B6L6 115 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 TRBV6-1A0A0K0K1D8 114 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 GRIFINA4D1Z8 144 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 MAP1LC3B2A6NCE7 125 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 TMEM262E9PQX1 116 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 AKR1C3P42330 323 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 FHITP49789 147 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 LINC01559Q495D7 138 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 CST9LP1Q5W188 147 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 KCNRGQ8N5I3 272 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 ZC2HC1AQ96GY0 325 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 MAP1LC3BQ9GZQ8 125 aa7.13□□□□□ -1.27
RNF4-218ENST00000513284 A0A087WWL8 130 aa7.12□□□□□ -1.27
RNF4-218ENST00000513284 HMSDA8MTL9 139 aa7.12□□□□□ -1.27
RNF4-218ENST00000513284 S100A9P06702 114 aaKnown RBP7.12□□□□□ -1.27
RNF4-218ENST00000513284 CRIP1P50238 77 aa7.12□□□□□ -1.27
RNF4-218ENST00000513284 ZNF345Q14585 488 aa7.12□□□□□ -1.27
RNF4-218ENST00000513284 ZNF674Q2M3X9 581 aa7.12□□□□□ -1.27
RNF4-218ENST00000513284 TMEM97Q5BJF2 176 aa7.12□□□□□ -1.27
RNF4-218ENST00000513284 SDIM1Q6ZPB5 146 aa7.12□□□□□ -1.27
RNF4-218ENST00000513284 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms