RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 TCL1AP56279 114 aa4.37□□□□□ -1.71
CLDND1-225ENST00000512147 ADIRFQ15847 76 aa4.37□□□□□ -1.71
CLDND1-225ENST00000512147 IBA57Q5T440 356 aaKnown RBP4.37□□□□□ -1.71
CLDND1-225ENST00000512147 FAM231DQ6ZW35 169 aa4.37□□□□□ -1.71
CLDND1-225ENST00000512147 ISOC2Q96AB3 205 aa4.37□□□□□ -1.71
CLDND1-225ENST00000512147 FAM210BQ96KR6 192 aa4.37□□□□□ -1.71
CLDND1-225ENST00000512147 TIMM8BQ9Y5J9 83 aaPredicted RBP4.37□□□□□ -1.71
CLDND1-225ENST00000512147 F8W036 122 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 GATCO43716 136 aaKnown RBP4.36□□□□□ -1.71
CLDND1-225ENST00000512147 P01737 135 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 GZMBP10144 247 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
CLDND1-225ENST00000512147 ERVFC1-1P60608 527 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 ZNF415Q09FC8 603 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 DAZ2Q13117 558 aaKnown RBP4.36□□□□□ -1.71
CLDND1-225ENST00000512147 DNLZQ5SXM8 178 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 C10orf91Q5T1B1 145 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 FAM222AQ5U5X8 452 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 OR2D3Q8NGH3 330 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 ZNRF2Q8NHG8 242 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 C9orf85Q96MD7 179 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 SEC11CQ9BY50 192 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 NOP10Q9NPE3 64 aaKnown RBP4.36□□□□□ -1.71
CLDND1-225ENST00000512147 OSTCQ9NRP0 149 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 DKK2Q9UBU2 259 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 CELA1Q9UNI1 258 aa4.36□□□□□ -1.71
CLDND1-225ENST00000512147 LYRM9A8MSI8 78 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 SNURFLB1AK76 121 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 H3BVH4 76 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 PANO1I0J062 215 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 SPINK4O60575 86 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 CXCL1P09341 107 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 SPART-AS1P0CW21 52 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 S100A4P26447 101 aaKnown RBP4.35□□□□□ -1.71
CLDND1-225ENST00000512147 KRTAP10-4P60372 401 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-225ENST00000512147 RPS20P60866 119 aaKnown RBP4.35□□□□□ -1.71
CLDND1-225ENST00000512147 C12orf74Q32Q52 190 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 Q6ZTI0 123 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 LINC00612Q8N6U2 182 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 OR10G8Q8NGN5 311 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 SFRP2Q96HF1 295 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 SPXQ9BT56 116 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 SSBP4Q9BWG4 385 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-225ENST00000512147 RPP21Q9H633 154 aaKnown RBP4.35□□□□□ -1.71
CLDND1-225ENST00000512147 IL36BQ9NZH7 164 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 V9GYV3 84 aa4.35□□□□□ -1.71
CLDND1-225ENST00000512147 TRGV1A0A0A0MS02 117 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 GAGE12BA1L429 117 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 XKRY2A2RUG3 117 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 A8MWL6 223 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 M0R2P5 195 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 SNAI2O43623 268 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 GAGE7O76087 117 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 OR5AL1P0C617 328 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 IGLC6P0CF74 106 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 GAGE12FP0CL80 117 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 GAGE12GP0CL81 117 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 GAGE12IP0CL82 117 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 DEFB130BP0DP73 79 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 DEFB130AP0DP74 79 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 PNRC1Q12796 327 aaPredicted RBP4.34□□□□□ -1.71
CLDND1-225ENST00000512147 NDUFA5Q16718 116 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 TTC32Q5I0X7 151 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 C15orf54Q8N8G6 183 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 GTSF1Q8WW33 167 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 RASL10AQ92737 203 aa4.34□□□□□ -1.71
CLDND1-225ENST00000512147 MRPL16Q9NX20 251 aaKnown RBP4.34□□□□□ -1.71
CLDND1-225ENST00000512147 CARHSP1Q9Y2V2 147 aaKnown RBP4.34□□□□□ -1.71
CLDND1-225ENST00000512147 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.72
CLDND1-225ENST00000512147 MUC21A0A0G2JKD1 596 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 MUC21A0A140T8X8 626 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 FOXA3P55318 350 aaPredicted RBP4.33□□□□□ -1.72
CLDND1-225ENST00000512147 DAD1P61803 113 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 ZNF876PQ49A33 203 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 CT83Q5H943 113 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 LYZL1Q6UWQ5 148 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 FER1L6-AS1Q8NA97 138 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 TSKUQ8WUA8 353 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 PTH2Q96A98 100 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 PHLDA3Q9Y5J5 127 aa4.33□□□□□ -1.72
CLDND1-225ENST00000512147 TNXBP22105 4242 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 FAM231BA6NCW3 169 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 F2Z2F3 143 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 M0R381 172 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 PPP1R2P9O14990 202 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 NXPH4O95158 308 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 APOC3P02656 99 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 MT-ND4LP03901 98 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 CTRLP40313 264 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 SSTP61278 116 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 PIK3CD-AS1Q5SR53 167 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 CLRN3Q8NCR9 226 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 OR10AG1Q8NH19 301 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 ANAPC16Q96DE5 110 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 PGLYRP4Q96LB8 373 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 TPPP3Q9BW30 176 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
CLDND1-225ENST00000512147 JPT2Q9H910 190 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms