RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
CLDND1-221ENST00000510541 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
CLDND1-221ENST00000510541 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
CLDND1-221ENST00000510541 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 CTRLP40313 264 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 RAB4BP61018 213 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 PEA15Q15121 130 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 SOHLH1Q5JUK2 328 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 FER1L6-AS1Q8NA97 138 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 OR10AG1Q8NH19 301 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 SMIM7Q9BQ49 75 aa11.85□□□□□ -0.51
CLDND1-221ENST00000510541 M0R381 172 aa11.84□□□□□ -0.51
CLDND1-221ENST00000510541 SIVA1O15304 175 aa11.84□□□□□ -0.51
CLDND1-221ENST00000510541 SPANXN1Q5VSR9 72 aa11.84□□□□□ -0.51
CLDND1-221ENST00000510541 OR10G8Q8NGN5 311 aa11.84□□□□□ -0.51
CLDND1-221ENST00000510541 SAMD10Q9BYL1 202 aa11.84□□□□□ -0.51
CLDND1-221ENST00000510541 RPP21Q9H633 154 aaKnown RBP11.84□□□□□ -0.51
CLDND1-221ENST00000510541 Q6ZSN1 163 aa11.83□□□□□ -0.52
CLDND1-221ENST00000510541 LINC01551Q86U37 167 aa11.83□□□□□ -0.52
CLDND1-221ENST00000510541 GTSF1LQ9H1H1 148 aa11.83□□□□□ -0.52
CLDND1-221ENST00000510541 JPT2Q9H910 190 aa11.83□□□□□ -0.52
CLDND1-221ENST00000510541 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
CLDND1-221ENST00000510541 ZNF727A8MUV8 499 aa11.82□□□□□ -0.52
CLDND1-221ENST00000510541 A8MWL6 223 aa11.82□□□□□ -0.52
CLDND1-221ENST00000510541 DNAH10OSP0CZ25 163 aa11.82□□□□□ -0.52
CLDND1-221ENST00000510541 C1orf134Q5TEV5 83 aa11.82□□□□□ -0.52
CLDND1-221ENST00000510541 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
CLDND1-221ENST00000510541 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
CLDND1-221ENST00000510541 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
CLDND1-221ENST00000510541 A0A087WWC5 75 aa11.81□□□□□ -0.52
CLDND1-221ENST00000510541 LELP1Q5T871 98 aa11.81□□□□□ -0.52
CLDND1-221ENST00000510541 ATP6V0E2Q8NHE4 81 aa11.81□□□□□ -0.52
CLDND1-221ENST00000510541 TRAV9-2A0A087WT02 112 aa11.8□□□□□ -0.52
CLDND1-221ENST00000510541 LOC100131303A0A0U1RQF7 123 aa11.8□□□□□ -0.52
CLDND1-221ENST00000510541 RTL8CO15255 209 aa11.8□□□□□ -0.52
CLDND1-221ENST00000510541 LINC00315P59091 139 aa11.8□□□□□ -0.52
CLDND1-221ENST00000510541 IGLV2-18A0A075B6J9 118 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 IGHV3-73A0A0B4J1V6 119 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 TRGC1P0CF51 173 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 RAB14P61106 215 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 TMEM241Q24JQ0 296 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 C6orf223Q8N319 242 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 FRZBQ92765 325 aa11.79□□□□□ -0.52
CLDND1-221ENST00000510541 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
CLDND1-221ENST00000510541 A0A087WWL8 130 aa11.78□□□□□ -0.52
CLDND1-221ENST00000510541 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
CLDND1-221ENST00000510541 CLLU1Q5K131 121 aa11.78□□□□□ -0.52
CLDND1-221ENST00000510541 FAM74A4Q5TZK3 123 aa11.78□□□□□ -0.52
CLDND1-221ENST00000510541 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
CLDND1-221ENST00000510541 C14orf178Q8N769 122 aaPredicted RBP11.78□□□□□ -0.52
CLDND1-221ENST00000510541 M0R2N4 97 aa11.77□□□□□ -0.53
CLDND1-221ENST00000510541 GATCO43716 136 aaKnown RBP11.77□□□□□ -0.53
CLDND1-221ENST00000510541 SMIM17P0DL12 118 aa11.77□□□□□ -0.53
CLDND1-221ENST00000510541 ERVFC1-1P60608 527 aa11.77□□□□□ -0.53
CLDND1-221ENST00000510541 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
CLDND1-221ENST00000510541 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
CLDND1-221ENST00000510541 NAT8Q9UHE5 227 aa11.77□□□□□ -0.53
CLDND1-221ENST00000510541 FRAS1Q86XX4 4008 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 TRAV8-6A0A0B4J262 113 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 C9JQL5 133 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 H7C1H1 209 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 GZMBP10144 247 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 NTF3P20783 257 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 UBE2D3P61077 147 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 UBE2D2P62837 147 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 TSKUQ8WUA8 353 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
CLDND1-221ENST00000510541 IGHV3-38A0A0C4DH36 116 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 EVI2AP22794 236 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 TMEM97Q5BJF2 176 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 C15orf54Q8N8G6 183 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 ISOC2Q96AB3 205 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 KRTAP1-5Q9BYS1 174 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 DPH3P1Q9H4G8 78 aa11.75□□□□□ -0.53
CLDND1-221ENST00000510541 CEBPGP53567 150 aa11.74□□□□□ -0.53
CLDND1-221ENST00000510541 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
CLDND1-221ENST00000510541 SRSF3P84103 164 aaKnown RBP11.74□□□□□ -0.53
CLDND1-221ENST00000510541 NFE4Q86UQ8 179 aa11.74□□□□□ -0.53
CLDND1-221ENST00000510541 DNAH10Q8IVF4 4471 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 A0A1B0GVY2 172 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 M0QY20 66 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 LAGE3Q14657 143 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
CLDND1-221ENST00000510541 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
CLDND1-221ENST00000510541 MSRB1Q9NZV6 116 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 Q9UF83 564 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 V9GYV3 84 aa11.73□□□□□ -0.53
CLDND1-221ENST00000510541 GAGE12JA6NER3 117 aa11.72□□□□□ -0.53
CLDND1-221ENST00000510541 PRSS29PA6NIE9 313 aa11.72□□□□□ -0.53
CLDND1-221ENST00000510541 GAGE1Q13065 139 aa11.72□□□□□ -0.53
CLDND1-221ENST00000510541 GAGE4Q13068 117 aa11.72□□□□□ -0.53
CLDND1-221ENST00000510541 GAGE5Q13069 117 aa11.72□□□□□ -0.53
CLDND1-221ENST00000510541 ZNF56Q15929 161 aa11.72□□□□□ -0.53
CLDND1-221ENST00000510541 GAGE13Q4V321 117 aa11.72□□□□□ -0.53
CLDND1-221ENST00000510541 WFDC10BQ8IUB3 73 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms