RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
VTI1A-209ENST00000496445 Q9HAA7 133 aa9.54□□□□□ -0.88
VTI1A-209ENST00000496445 TMSB15BA0A087X1C1 80 aa9.53□□□□□ -0.88
VTI1A-209ENST00000496445 PAGE4O60829 102 aa9.53□□□□□ -0.88
VTI1A-209ENST00000496445 AKR1C3P42330 323 aa9.53□□□□□ -0.88
VTI1A-209ENST00000496445 LAGE3Q14657 143 aa9.53□□□□□ -0.88
VTI1A-209ENST00000496445 STOML3Q8TAV4 291 aa9.53□□□□□ -0.88
VTI1A-209ENST00000496445 A0A1B0GV50 99 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 HMSDA8MTL9 139 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 BCL2L11O43521 198 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 PSCAO43653 123 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 SEC11BP0C7V7 166 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 MBD3L1Q8WWY6 194 aa9.52□□□□□ -0.89
VTI1A-209ENST00000496445 A0A087WWL8 130 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 SCO2A0A1W2PP80 73 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 M0R381 172 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 RHODO00212 210 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 GCSHP23434 173 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 FAM74A4Q5TZK3 123 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 Q8N814 137 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 SFRP2Q96HF1 295 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 ZNF471Q9BX82 626 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-209ENST00000496445 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
VTI1A-209ENST00000496445 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
VTI1A-209ENST00000496445 TPT1P13693 172 aaKnown RBP9.5□□□□□ -0.89
VTI1A-209ENST00000496445 RPL19P84098 196 aaKnown RBP9.5□□□□□ -0.89
VTI1A-209ENST00000496445 WFDC2Q14508 124 aa9.5□□□□□ -0.89
VTI1A-209ENST00000496445 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
VTI1A-209ENST00000496445 KANTRA0A1W2PQU2 76 aa9.49□□□□□ -0.89
VTI1A-209ENST00000496445 EPM2AB3EWF7 344 aa9.49□□□□□ -0.89
VTI1A-209ENST00000496445 UMAD1C9J7I0 102 aa9.49□□□□□ -0.89
VTI1A-209ENST00000496445 DAZ4Q86SG3 579 aaKnown RBP9.49□□□□□ -0.89
VTI1A-209ENST00000496445 ZFP82Q8N141 532 aa9.49□□□□□ -0.89
VTI1A-209ENST00000496445 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-209ENST00000496445 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
VTI1A-209ENST00000496445 DAZ3Q9NR90 486 aaKnown RBP9.49□□□□□ -0.89
VTI1A-209ENST00000496445 A0A0D9SG52 128 aa9.48□□□□□ -0.89
VTI1A-209ENST00000496445 HAMPP81172 84 aa9.48□□□□□ -0.89
VTI1A-209ENST00000496445 A0A087WWC5 75 aa9.47□□□□□ -0.89
VTI1A-209ENST00000496445 Q5VSD8 79 aa9.47□□□□□ -0.89
VTI1A-209ENST00000496445 OR10AG1Q8NH19 301 aa9.47□□□□□ -0.89
VTI1A-209ENST00000496445 PFDN1O60925 122 aa9.46□□□□□ -0.9
VTI1A-209ENST00000496445 S100A9P06702 114 aaKnown RBP9.46□□□□□ -0.9
VTI1A-209ENST00000496445 CXCL1P09341 107 aa9.46□□□□□ -0.9
VTI1A-209ENST00000496445 H2AFB1P0C5Y9 115 aa9.46□□□□□ -0.9
VTI1A-209ENST00000496445 TMUB2Q71RG4 321 aa9.46□□□□□ -0.9
VTI1A-209ENST00000496445 NIT1Q86X76 327 aa9.46□□□□□ -0.9
VTI1A-209ENST00000496445 TRBV10-1A0A0K0K1A3 114 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 SNAI2O43623 268 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
VTI1A-209ENST00000496445 UBE2D3P61077 147 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 UBE2D2P62837 147 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 CCL20P78556 96 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 BAGE2Q86Y30 109 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 TM2D2Q9BX73 214 aa9.45□□□□□ -0.9
VTI1A-209ENST00000496445 TRAV8-3A0A0A6YYJ7 113 aa9.44□□□□□ -0.9
VTI1A-209ENST00000496445 LECT2O14960 151 aa9.44□□□□□ -0.9
VTI1A-209ENST00000496445 SMR3BP02814 79 aaPredicted RBP9.44□□□□□ -0.9
VTI1A-209ENST00000496445 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
VTI1A-209ENST00000496445 PRR27Q6MZM9 219 aa9.44□□□□□ -0.9
VTI1A-209ENST00000496445 OR10G8Q8NGN5 311 aa9.44□□□□□ -0.9
VTI1A-209ENST00000496445 TMEM70Q9BUB7 260 aa9.44□□□□□ -0.9
VTI1A-209ENST00000496445 DERL1Q9BUN8 251 aa9.44□□□□□ -0.9
VTI1A-209ENST00000496445 SSBP4Q9BWG4 385 aaPredicted RBP9.44□□□□□ -0.9
VTI1A-209ENST00000496445 MUC21A0A0G2JKD1 596 aa9.43□□□□□ -0.9
VTI1A-209ENST00000496445 MUC21A0A140T8X8 626 aa9.43□□□□□ -0.9
VTI1A-209ENST00000496445 EIF5AP63241 154 aaKnown RBP9.43□□□□□ -0.9
VTI1A-209ENST00000496445 TOR2AQ5JU69 321 aa9.43□□□□□ -0.9
VTI1A-209ENST00000496445 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
VTI1A-209ENST00000496445 C11orf52Q96A22 123 aa9.43□□□□□ -0.9
VTI1A-209ENST00000496445 MANBALQ9NQG1 85 aa9.43□□□□□ -0.9
VTI1A-209ENST00000496445 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
VTI1A-209ENST00000496445 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
VTI1A-209ENST00000496445 OR5AL1P0C617 328 aa9.42□□□□□ -0.9
VTI1A-209ENST00000496445 RAB4BP61018 213 aa9.42□□□□□ -0.9
VTI1A-209ENST00000496445 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
VTI1A-209ENST00000496445 ZNF56Q15929 161 aa9.42□□□□□ -0.9
VTI1A-209ENST00000496445 FRZBQ92765 325 aa9.42□□□□□ -0.9
VTI1A-209ENST00000496445 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
VTI1A-209ENST00000496445 GNG13Q9P2W3 67 aa9.42□□□□□ -0.9
VTI1A-209ENST00000496445 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-209ENST00000496445 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
VTI1A-209ENST00000496445 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
VTI1A-209ENST00000496445 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
VTI1A-209ENST00000496445 BAALCQ8WXS3 180 aa9.41□□□□□ -0.9
VTI1A-209ENST00000496445 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
VTI1A-209ENST00000496445 KLK12Q9UKR0 248 aa9.41□□□□□ -0.9
VTI1A-209ENST00000496445 URGCP-MRPS24S4R325 110 aa9.41□□□□□ -0.9
VTI1A-209ENST00000496445 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
VTI1A-209ENST00000496445 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
VTI1A-209ENST00000496445 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-209ENST00000496445 IGKV2D-24A0A075B6R9 120 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 C1QBP02746 253 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 SPANXN1Q5VSR9 72 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms