RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 TMEM61Q8N0U2 210 aa11.53□□□□□ -0.56
SHISA5-216ENST00000494854 DYNLRB2Q8TF09 96 aa11.53□□□□□ -0.56
SHISA5-216ENST00000494854 AP1S3Q96PC3 154 aa11.53□□□□□ -0.56
SHISA5-216ENST00000494854 EREGO14944 169 aa11.52□□□□□ -0.56
SHISA5-216ENST00000494854 DEFB131AP59861 70 aa11.52□□□□□ -0.56
SHISA5-216ENST00000494854 AMTNQ6UX39 209 aa11.52□□□□□ -0.56
SHISA5-216ENST00000494854 SNHG12Q9BXW3 62 aa11.52□□□□□ -0.56
SHISA5-216ENST00000494854 M0R143 59 aa11.52□□□□□ -0.57
SHISA5-216ENST00000494854 FCER1GP30273 86 aa11.52□□□□□ -0.57
SHISA5-216ENST00000494854 NSUN5P1Q3KNT7 163 aa11.52□□□□□ -0.57
SHISA5-216ENST00000494854 RAX2Q96IS3 184 aa11.52□□□□□ -0.57
SHISA5-216ENST00000494854 PMCHL2Q9BQD1 86 aa11.52□□□□□ -0.57
SHISA5-216ENST00000494854 WIPF1O43516 503 aa11.51□□□□□ -0.57
SHISA5-216ENST00000494854 DEFB114Q30KQ6 69 aa11.51□□□□□ -0.57
SHISA5-216ENST00000494854 IFI27L1Q96BM0 104 aa11.51□□□□□ -0.57
SHISA5-216ENST00000494854 C2orf88Q9BSF0 95 aa11.51□□□□□ -0.57
SHISA5-216ENST00000494854 A0A1W2PRX2 142 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 MGPP08493 103 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 FHL3Q13643 280 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 MRPL52Q86TS9 123 aaKnown RBP11.5□□□□□ -0.57
SHISA5-216ENST00000494854 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
SHISA5-216ENST00000494854 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 IGHV3-16A0A0C4DH30 117 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 HSBP1L1C9JCN9 74 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 HLA-DRB4P13762 266 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 Q6ZN92 141 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 HLA-DRB4X5D2U9 266 aa11.5□□□□□ -0.57
SHISA5-216ENST00000494854 A8MTW9 85 aa11.49□□□□□ -0.57
SHISA5-216ENST00000494854 LGALS9BQ3B8N2 356 aa11.49□□□□□ -0.57
SHISA5-216ENST00000494854 LGALS9CQ6DKI2 356 aa11.49□□□□□ -0.57
SHISA5-216ENST00000494854 Q8N1Y9 231 aa11.49□□□□□ -0.57
SHISA5-216ENST00000494854 RASL10AQ92737 203 aa11.49□□□□□ -0.57
SHISA5-216ENST00000494854 C9orf85Q96MD7 179 aa11.49□□□□□ -0.57
SHISA5-216ENST00000494854 CCL24O00175 119 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 CD300EQ496F6 205 aaPredicted RBP11.48□□□□□ -0.57
SHISA5-216ENST00000494854 POM121L12Q8N7R1 296 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 KIF25-AS1Q9Y6Z4 181 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 H3BMM0 161 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 SMIM17P0DL12 118 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 HNRNPA3P51991 378 aaKnown RBP11.48□□□□□ -0.57
SHISA5-216ENST00000494854 LAGE3Q14657 143 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 WFDC9Q8NEX5 89 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 C18orf15Q96N68 181 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 SMIM2Q9BVW6 85 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 MDFICQ9P1T7 246 aa11.48□□□□□ -0.57
SHISA5-216ENST00000494854 TCAPO15273 167 aa11.47□□□□□ -0.57
SHISA5-216ENST00000494854 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
SHISA5-216ENST00000494854 ZNF124Q15973 351 aa11.47□□□□□ -0.57
SHISA5-216ENST00000494854 SAMD5Q5TGI4 173 aa11.47□□□□□ -0.57
SHISA5-216ENST00000494854 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
SHISA5-216ENST00000494854 C20orf78Q9BR46 151 aa11.47□□□□□ -0.57
SHISA5-216ENST00000494854 GOLT1BQ9Y3E0 138 aa11.47□□□□□ -0.57
SHISA5-216ENST00000494854 LINC00315P59091 139 aa11.47□□□□□ -0.57
SHISA5-216ENST00000494854 KPRPQ5T749 579 aaPredicted RBP11.47□□□□□ -0.57
SHISA5-216ENST00000494854 SPAG8Q99932 426 aaPredicted RBP11.47□□□□□ -0.57
SHISA5-216ENST00000494854 JPT2Q9H910 190 aa11.47□□□□□ -0.57
SHISA5-216ENST00000494854 A0A1B0GV90 55 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 RBMY1BA6NDE4 496 aaKnown RBP11.45□□□□□ -0.58
SHISA5-216ENST00000494854 RBMY1EA6NEQ0 496 aaKnown RBP11.45□□□□□ -0.58
SHISA5-216ENST00000494854 PPP1R17O96001 155 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 RBMY1DP0C7P1 496 aaKnown RBP11.45□□□□□ -0.58
SHISA5-216ENST00000494854 RBMY1A1P0DJD3 496 aaKnown RBP11.45□□□□□ -0.58
SHISA5-216ENST00000494854 RBMY1CP0DJD4 496 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 RBMY1FQ15415 496 aaKnown RBP11.45□□□□□ -0.58
SHISA5-216ENST00000494854 BEAN1Q3B7T3 259 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 SYT8Q8NBV8 401 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 ZNF256Q9Y2P7 627 aaPredicted RBP11.45□□□□□ -0.58
SHISA5-216ENST00000494854 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 TRAV25A0A0B4J276 109 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 G3V4G9 280 aa11.45□□□□□ -0.58
SHISA5-216ENST00000494854 A0A087WWL8 130 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 CBY3A6NI87 242 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 MRPS16Q9Y3D3 137 aaKnown RBP11.43□□□□□ -0.58
SHISA5-216ENST00000494854 TGP01266 2768 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 K7EMI3 77 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 ATP5LO75964 103 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 NUDT3O95989 172 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 SUMO4Q6EEV6 95 aa11.43□□□□□ -0.58
SHISA5-216ENST00000494854 PRSS1P07477 247 aa11.42□□□□□ -0.58
SHISA5-216ENST00000494854 PF4P02776 101 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 BATFQ16520 125 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 SLC25A34Q6PIV7 304 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 F5H697 171 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 ODF3L2Q3SX64 289 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 OXLD1Q5BKU9 147 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 FAM74A4Q5TZK3 123 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 TP73-AS1Q9UF72 201 aa11.41□□□□□ -0.58
SHISA5-216ENST00000494854 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
SHISA5-216ENST00000494854 ODF1Q14990 250 aa11.4□□□□□ -0.58
SHISA5-216ENST00000494854 ZNF876PQ49A33 203 aa11.4□□□□□ -0.58
SHISA5-216ENST00000494854 PRKDCP78527 4128 aaKnown RBP11.39□□□□□ -0.59
SHISA5-216ENST00000494854 CRYGDP07320 174 aa11.39□□□□□ -0.59
SHISA5-216ENST00000494854 HTN1P15515 57 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms