RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 C20orf78Q9BR46 151 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 FOXA2Q9Y261 457 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-234ENST00000493923 U3KQK5 164 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 PLECQ15149 4684 aaKnown RBP6.19□□□□□ -1.42
HDAC6-234ENST00000493923 A0A087WX48 190 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 A0A1B0GUT8 65 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 C19orf71A6NCJ1 209 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 ACTL6BO94805 426 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 TRBV12-3P01733 135 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 APELAP0DMC3 54 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 RPS16P62249 146 aaKnown RBP6.18□□□□□ -1.42
HDAC6-234ENST00000493923 PLGLAQ15195 96 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 TWIST1Q15672 202 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 OR10J6PQ8NGY7 276 aa6.18□□□□□ -1.42
HDAC6-234ENST00000493923 PRSS29PA6NIE9 313 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 LINC00473A8K010 186 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 NPIPB5A8MRT5 1133 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 A8MWV9 139 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 HSPE1P61604 102 aaKnown RBP6.17□□□□□ -1.42
HDAC6-234ENST00000493923 ZNF493Q6ZR52 646 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 Q8N1Y9 231 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 PGLYRP4Q96LB8 373 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 DNAJC30Q96LL9 226 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 LINC00479Q96M42 142 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 PAXXQ9BUH6 204 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 ZMAT4Q9H898 229 aa6.17□□□□□ -1.42
HDAC6-234ENST00000493923 C15orf61A6NNL5 157 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 COX7A2P2O60397 106 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 DPM2O94777 84 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 BRI3O95415 125 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 IGKCP01834 107 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 TRGV3P03979 118 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 NHLRC4P0CG21 123 aaPredicted RBP6.16□□□□□ -1.42
HDAC6-234ENST00000493923 GP9P14770 177 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 PDPNQ86YL7 162 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 DDB2Q92466 427 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 ZNF503Q96F45 646 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 MLST8Q9BVC4 326 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 PRNDQ9UKY0 176 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 EPDR1Q9UM22 224 aa6.16□□□□□ -1.42
HDAC6-234ENST00000493923 F11RQ9Y624 299 aaKnown RBP6.16□□□□□ -1.42
HDAC6-234ENST00000493923 EPPK1P58107 5090 aaKnown RBP6.15□□□□□ -1.42
HDAC6-234ENST00000493923 TRBV25-1A0A075B6N4 114 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 NCR2O95944 276 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 LTAP01374 205 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 EDN2P20800 178 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 INSL3P51460 131 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 SUB1P53999 127 aaKnown RBP eCLIP6.15□□□□□ -1.42
HDAC6-234ENST00000493923 C2orf83Q53S99 150 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 C10orf55Q5SWW7 151 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 ORMDL3Q8N138 153 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 OR1L8Q8NGR8 309 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 OR13C6PQ8NH95 151 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 FLYWCH2Q96CP2 140 aaKnown RBP6.15□□□□□ -1.42
HDAC6-234ENST00000493923 RNF5Q99942 180 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 TPPP3Q9BW30 176 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 MDFICQ9P1T7 246 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 SMAD5-AS1Q9Y6J3 95 aa6.15□□□□□ -1.42
HDAC6-234ENST00000493923 HYDINQ4G0P3 5121 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 ALMS1Q8TCU4 4167 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 TRAV25A0A0B4J276 109 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 A0A1B0GX51 115 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 LINC01546A6NGU7 62 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 K7ERJ3 54 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 IGLV1-51P01701 117 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 CSN3P07498 182 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 SCGB1C2P0DMR2 95 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 MYOD1P15172 320 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 BRWD1-AS2P59051 145 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 SPINK9Q5DT21 86 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 C10orf113Q5VZT2 155 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 FAM167A-AS1Q96KT0 104 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 HIST1H4GQ99525 98 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 SELENOKQ9Y6D0 94 aa6.14□□□□□ -1.43
HDAC6-234ENST00000493923 E7EUB6 86 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 FCGR3BO75015 233 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 ATP5G1P05496 136 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 PLNP26678 52 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 SYNJ2BPP57105 145 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 VKORC1L1Q8N0U8 176 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 NXT2Q9NPJ8 142 aaKnown RBP6.13□□□□□ -1.43
HDAC6-234ENST00000493923 TMEM14BQ9NUH8 114 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 C19orf73Q9NVV2 129 aa6.13□□□□□ -1.43
HDAC6-234ENST00000493923 CSDC2Q9Y534 153 aaKnown RBP6.13□□□□□ -1.43
HDAC6-234ENST00000493923 TIMM8BQ9Y5J9 83 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-234ENST00000493923 BIRC6Q9NR09 4857 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 TRBV7-3A0A075B6L6 115 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 MYMXA0A1B0GTQ4 84 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 INS-IGF2F8WCM5 200 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 J3KT08 172 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 SAA1P0DJI8 122 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-234ENST00000493923 IGHV4-30-4P0DP06 118 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 FCER1GP30273 86 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 ID1P41134 155 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 PRCDQ00LT1 54 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 TM4SF20Q53R12 229 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 MEIG1Q5JSS6 88 aa6.12□□□□□ -1.43
HDAC6-234ENST00000493923 CASC10Q5T4H9 136 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms