RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ASXL3Q9C0F0 2248 aa-0.22□□□□□ -2.45
SMC4-223ENST00000493695 LAMB1P07942 1786 aa-0.23□□□□□ -2.45
SMC4-223ENST00000493695 CCDC179H3BU77 68 aa-0.23□□□□□ -2.45
SMC4-223ENST00000493695 NPC2P61916 151 aa-0.23□□□□□ -2.45
SMC4-223ENST00000493695 CLLU1Q5K131 121 aa-0.23□□□□□ -2.45
SMC4-223ENST00000493695 Q96NJ1 140 aa-0.23□□□□□ -2.45
SMC4-223ENST00000493695 CACNA1AO00555 2505 aa-0.23□□□□□ -2.45
SMC4-223ENST00000493695 FLNCQ14315 2725 aa-0.24□□□□□ -2.45
SMC4-223ENST00000493695 J3QLW9 94 aa-0.24□□□□□ -2.45
SMC4-223ENST00000493695 DBIP07108 87 aaKnown RBP-0.24□□□□□ -2.45
SMC4-223ENST00000493695 SSBP1Q04837 148 aaKnown RBP-0.24□□□□□ -2.45
SMC4-223ENST00000493695 CYP2G1PQ6ZSU1 146 aa-0.24□□□□□ -2.45
SMC4-223ENST00000493695 SMIM11BQ8TCY0 68 aa-0.24□□□□□ -2.45
SMC4-223ENST00000493695 MYO7AQ13402 2215 aa-0.25□□□□□ -2.45
SMC4-223ENST00000493695 TRBV20-1A0A075B6N2 111 aa-0.25□□□□□ -2.45
SMC4-223ENST00000493695 ERCC6Q03468 1493 aa-0.25□□□□□ -2.45
SMC4-223ENST00000493695 SYNJ1O43426 1573 aa-0.25□□□□□ -2.45
SMC4-223ENST00000493695 PHIPQ8WWQ0 1821 aa-0.25□□□□□ -2.45
SMC4-223ENST00000493695 AKAP11Q9UKA4 1901 aa-0.25□□□□□ -2.45
SMC4-223ENST00000493695 CACNA1CQ13936 2221 aa-0.25□□□□□ -2.45
SMC4-223ENST00000493695 NMBP08949 121 aa-0.26□□□□□ -2.45
SMC4-223ENST00000493695 SCGB1A1P11684 91 aa-0.26□□□□□ -2.45
SMC4-223ENST00000493695 COX4I1P13073 169 aa-0.26□□□□□ -2.45
SMC4-223ENST00000493695 COX6A2Q02221 97 aa-0.26□□□□□ -2.45
SMC4-223ENST00000493695 MRPL40Q9NQ50 206 aaKnown RBP-0.26□□□□□ -2.45
SMC4-223ENST00000493695 NRXN2Q9P2S2 1712 aa-0.27□□□□□ -2.45
SMC4-223ENST00000493695 ADGRB1O14514 1584 aa-0.27□□□□□ -2.45
SMC4-223ENST00000493695 COX7B2Q8TF08 81 aa-0.27□□□□□ -2.45
SMC4-223ENST00000493695 TMEM242Q9NWH2 141 aa-0.27□□□□□ -2.45
SMC4-223ENST00000493695 TENM4Q6N022 2769 aa-0.27□□□□□ -2.45
SMC4-223ENST00000493695 CSMD3Q7Z407 3707 aa-0.28□□□□□ -2.45
SMC4-223ENST00000493695 OVOS2A0A0J9YW53 1432 aa-0.28□□□□□ -2.45
SMC4-223ENST00000493695 OVOS2Q6IE36 1432 aa-0.28□□□□□ -2.45
SMC4-223ENST00000493695 LINC01545Q5VT33 79 aa-0.28□□□□□ -2.45
SMC4-223ENST00000493695 C4orf33Q8N1A6 199 aa-0.28□□□□□ -2.45
SMC4-223ENST00000493695 C20orf197Q8N268 126 aa-0.28□□□□□ -2.45
SMC4-223ENST00000493695 U3KQA8 63 aa-0.28□□□□□ -2.45
SMC4-223ENST00000493695 MUC22E2RYF6 1773 aaPredicted RBP-0.28□□□□□ -2.45
SMC4-223ENST00000493695 NSD1Q96L73 2696 aaPredicted RBP-0.28□□□□□ -2.45
SMC4-223ENST00000493695 ANKRD30AQ9BXX3 1397 aa-0.29□□□□□ -2.46
SMC4-223ENST00000493695 TRAV12-3A0A0B4J271 114 aa-0.29□□□□□ -2.46
SMC4-223ENST00000493695 SPCS2Q15005 226 aa-0.29□□□□□ -2.46
SMC4-223ENST00000493695 NDUFA12Q9UI09 145 aa-0.29□□□□□ -2.46
SMC4-223ENST00000493695 CADP27708 2225 aa-0.29□□□□□ -2.46
SMC4-223ENST00000493695 KIAA0100Q14667 2235 aaKnown RBP-0.29□□□□□ -2.46
SMC4-223ENST00000493695 SIPA1L3O60292 1781 aaPredicted RBP-0.29□□□□□ -2.46
SMC4-223ENST00000493695 TRBV7-1A0A0A6YYK4 115 aa-0.3□□□□□ -2.46
SMC4-223ENST00000493695 APODP05090 189 aa-0.3□□□□□ -2.46
SMC4-223ENST00000493695 TSPAN19P0C672 248 aa-0.3□□□□□ -2.46
SMC4-223ENST00000493695 SLC48A1Q6P1K1 146 aa-0.3□□□□□ -2.46
SMC4-223ENST00000493695 IGLC6P0CF74 106 aa-0.31□□□□□ -2.46
SMC4-223ENST00000493695 FAM74A4Q5TZK3 123 aa-0.31□□□□□ -2.46
SMC4-223ENST00000493695 VSTM2AQ8TAG5 236 aa-0.31□□□□□ -2.46
SMC4-223ENST00000493695 V9GYV3 84 aa-0.31□□□□□ -2.46
SMC4-223ENST00000493695 ABCA2Q9BZC7 2435 aa-0.31□□□□□ -2.46
SMC4-223ENST00000493695 PRG4Q92954 1404 aaPredicted RBP-0.31□□□□□ -2.46
SMC4-223ENST00000493695 HMCN2Q8NDA2 5059 aa-0.31□□□□□ -2.46
SMC4-223ENST00000493695 CDK5RAP2Q96SN8 1893 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 FAM236AA0A1B0GUQ0 79 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 FAM236BA0A1B0GV22 79 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 PITX3O75364 302 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 NCS1P62166 190 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 INSL4Q14641 139 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 Q6ZRX8 168 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 MMGT1Q8N4V1 131 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 FAM213BQ8TBF2 198 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 PYDC1Q8WXC3 89 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 AIF1LQ9BQI0 150 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 SAR1AQ9NR31 198 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 DISP2A7MBM2 1401 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 MYH13Q9UKX3 1938 aa-0.32□□□□□ -2.46
SMC4-223ENST00000493695 PARP14Q460N5 1801 aa-0.33□□□□□ -2.46
SMC4-223ENST00000493695 DR1Q01658 176 aa-0.33□□□□□ -2.46
SMC4-223ENST00000493695 HIST1H1AQ02539 215 aaPredicted RBP-0.33□□□□□ -2.46
SMC4-223ENST00000493695 AKAP14Q86UN6 197 aa-0.33□□□□□ -2.46
SMC4-223ENST00000493695 ZNF292O60281 2723 aa-0.33□□□□□ -2.46
SMC4-223ENST00000493695 WNK2Q9Y3S1 2297 aa-0.34□□□□□ -2.46
SMC4-223ENST00000493695 GOLGA3Q08378 1498 aa-0.34□□□□□ -2.46
SMC4-223ENST00000493695 CLPSL1A2RUU4 121 aa-0.34□□□□□ -2.46
SMC4-223ENST00000493695 TMEM14DPA8MWL7 114 aa-0.34□□□□□ -2.46
SMC4-223ENST00000493695 NCR2O95944 276 aa-0.34□□□□□ -2.46
SMC4-223ENST00000493695 ACYP2P14621 99 aa-0.34□□□□□ -2.46
SMC4-223ENST00000493695 MIC13Q5XKP0 118 aa-0.34□□□□□ -2.46
SMC4-223ENST00000493695 TRGV1A0A0A0MS02 117 aa-0.35□□□□□ -2.47
SMC4-223ENST00000493695 UBE2D1P51668 147 aa-0.35□□□□□ -2.47
SMC4-223ENST00000493695 C9orf116Q5BN46 136 aaPredicted RBP-0.35□□□□□ -2.47
SMC4-223ENST00000493695 SPANXN1Q5VSR9 72 aa-0.35□□□□□ -2.47
SMC4-223ENST00000493695 IBTKQ9P2D0 1353 aaPredicted RBP-0.35□□□□□ -2.47
SMC4-223ENST00000493695 AHCTF1Q8WYP5 2266 aa-0.35□□□□□ -2.47
SMC4-223ENST00000493695 ARFGEF1Q9Y6D6 1849 aa-0.36□□□□□ -2.47
SMC4-223ENST00000493695 G3V318 75 aa-0.36□□□□□ -2.47
SMC4-223ENST00000493695 PIRTP0C851 137 aa-0.36□□□□□ -2.47
SMC4-223ENST00000493695 LINC00694P0DN24 101 aa-0.36□□□□□ -2.47
SMC4-223ENST00000493695 TMEM2Q9UHN6 1383 aa-0.36□□□□□ -2.47
SMC4-223ENST00000493695 EDDM3BP56851 147 aa-0.37□□□□□ -2.47
SMC4-223ENST00000493695 CKS1BP61024 79 aa-0.37□□□□□ -2.47
SMC4-223ENST00000493695 Q5VV11 94 aa-0.37□□□□□ -2.47
SMC4-223ENST00000493695 C10orf82Q8WW14 230 aa-0.37□□□□□ -2.47
SMC4-223ENST00000493695 WFDC6Q9BQY6 131 aa-0.37□□□□□ -2.47
SMC4-223ENST00000493695 BATF3Q9NR55 127 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms