RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PRNT	Q86SH4	94 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	CYB561D1	Q8N8Q1	229 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	ATP6V0E2	Q8NHE4	81 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	RAB24	Q969Q5	203 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	HIST1H2BA	Q96A08	127 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	ZNF479	Q96JC4	524 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	TCEAL7	Q9BRU2	100 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	PSMG3	Q9BT73	122 aa	Predicted RBP	3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	GTSF1L	Q9H1H1	148 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	VAX2	Q9UIW0	290 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	ZFP30	Q9Y2G7	519 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	KIF25-AS1	Q9Y6Z4	181 aa		3.41	□□□□□ -1.86
SEC13-219	ENST00000492602	MUC17	Q685J3	4493 aa		3.4	□□□□□ -1.86
SEC13-219	ENST00000492602		A0A087WX48	190 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	TRAV8-1	A0A0A6YYK1	113 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	IGHV3-16	A0A0C4DH30	117 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602		A0A1W2PRE2	83 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602		B4DEV8	164 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	RHOD	O00212	210 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	PHOX2A	O14813	284 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	PTTG1	O95997	202 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	GCG	P01275	180 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	TCRA	P04437	139 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	SFTA3	P0C7M3	94 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	ARL14EPL	P0DKL9	152 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	SMIM17	P0DL12	118 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	ATP6V0C	P27449	155 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	GCHFR	P30047	84 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	LINC01547	P58512	204 aa	Predicted RBP	3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	RAB2A	P61019	212 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	FLI1	Q01543	452 aa	Predicted RBP	3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	LAGE3	Q14657	143 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	CST9LP1	Q5W188	147 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	ZFP2	Q6ZN57	461 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	OR2G3	Q8NGZ4	309 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	PTH2	Q96A98	100 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	PSG8	Q9UQ74	426 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	PHLDA3	Q9Y5J5	127 aa		3.4	□□□□□ -1.87
SEC13-219	ENST00000492602	FXYD6-FXYD2	A0A087WZ82	144 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	TMEM262	E9PQX1	116 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602		H0YIZ8	118 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	PFDN1	O60925	122 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	GIP	P09681	153 aa	Predicted RBP	3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	H2AFB1	P0C5Y9	115 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	STAG3L2	P0CL84	134 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	STAG3L3	P0CL85	134 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	TPT1	P13693	172 aa	Known RBP	3.39	□□□□□ -1.87
SEC13-219	ENST00000492602		Q0VG73	95 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	C14orf177	Q52M58	125 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	FAM162B	Q5T6X4	162 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	EIF5AL1	Q6IS14	154 aa	Known RBP	3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	SLC25A29	Q8N8R3	303 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	TMEM75	Q8N9X5	138 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	OR11H4	Q8NGC9	324 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	DPH3	Q96FX2	82 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	FMC1	Q96HJ9	113 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	AQP10	Q96PS8	301 aa		3.39	□□□□□ -1.87
SEC13-219	ENST00000492602	IGHV3-73	A0A0B4J1V6	119 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	TRAV26-2	A0A0B4J265	109 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	LOC100131303	A0A0U1RQF7	123 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	CTXND1	A0A1B0GTU2	59 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	XKRY2	A2RUG3	117 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	UMAD1	C9J7I0	102 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602		H7C1H1	209 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	EIF3G	O75821	320 aa	Known RBP eCLIP	3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	TYMS	P04818	313 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	GATA1	P15976	413 aa	Predicted RBP	3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	RPL36A	P83881	106 aa	Known RBP	3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	TMEM97	Q5BJF2	176 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	CFAP126	Q5VTH2	177 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	SPINK6	Q6UWN8	80 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	OR2T35	Q8NGX2	323 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	RPL36AL	Q969Q0	106 aa	Known RBP	3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	BIN3	Q9NQY0	253 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	ALG5	Q9Y673	324 aa		3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	SYNE2	Q8WXH0	6885 aa	Known RBP	3.38	□□□□□ -1.87
SEC13-219	ENST00000492602	KANTR	A0A1W2PQU2	76 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	GAGE12J	A6NER3	117 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602		F5H697	171 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	PEX7	O00628	323 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	FHIT	P49789	147 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	UBE2G2	P60604	165 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	GNG5	P63218	68 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	GAGE1	Q13065	139 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	GAGE4	Q13068	117 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	GAGE5	Q13069	117 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	RGS21	Q2M5E4	152 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	GAGE13	Q4V321	117 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	CT83	Q5H943	113 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	ZNF506	Q5JVG8	444 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	ZFP82	Q8N141	532 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602		Q8N3U1	123 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	SUN5	Q8TC36	379 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	C7orf33	Q8WU49	177 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	ZC2HC1A	Q96GY0	325 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	SGK494	Q96LW2	274 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	ZNF471	Q9BX82	626 aa	Predicted RBP	3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	WFDC1	Q9HC57	220 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	IL36B	Q9NZH7	164 aa		3.37	□□□□□ -1.87
SEC13-219	ENST00000492602	TRBV7-3	A0A075B6L6	115 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms