RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 UCNP55089 124 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 ATP1A1-AS1Q5TC04 95 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 MRAPQ8TCY5 172 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 METTL26Q96S19 204 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 USP24Q9UPU5 2620 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 PHLDA3Q9Y5J5 127 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 AHCTF1Q8WYP5 2266 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 IGHV3-23P01764 117 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 S100A4P26447 101 aaKnown RBP4.87□□□□□ -1.63
CCDC6-202ENST00000491922 HERVK_113P63121 156 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 GPHB5Q86YW7 130 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 DUX3Q96PT4 197 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 ICE1Q9Y2F5 2266 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 ZFHX4Q86UP3 3567 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 PLCE1Q9P212 2302 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 TRAV17A0A0B4J275 112 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 A0A0G2JNJ9 132 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
CCDC6-202ENST00000491922 KIR2DL5BQ8NHK3 375 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 Q9UFV3 132 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 ZNF256Q9Y2P7 627 aaPredicted RBP4.86□□□□□ -1.63
CCDC6-202ENST00000491922 MAP1BP46821 2468 aaKnown RBP4.86□□□□□ -1.63
CCDC6-202ENST00000491922 IGHV4OR15-8A0A075B7B6 117 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 A0A087WW49 117 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 TRAV21A0A0B4J279 112 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 OOSP1A8MZH6 123 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 LST1O00453 97 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 VCYO14598 125 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 IGHV1-69P01742 117 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 OR13C6PQ8NH95 151 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 ZFAND3Q9H8U3 227 aa4.86□□□□□ -1.63
CCDC6-202ENST00000491922 POLR2KP53803 58 aaKnown RBP4.85□□□□□ -1.63
CCDC6-202ENST00000491922 PRB3Q04118 309 aaPredicted RBP4.85□□□□□ -1.63
CCDC6-202ENST00000491922 PRR9Q5T870 116 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 LINC00643Q86TS7 51 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 FASNP49327 2511 aaKnown RBP4.85□□□□□ -1.63
CCDC6-202ENST00000491922 URB1O60287 2271 aaKnown RBP4.85□□□□□ -1.63
CCDC6-202ENST00000491922 DCHS1Q96JQ0 3298 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 IGHV3OR16-8A0A075B7F1 116 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 A0A0J9YXY3 114 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 LOC107984640A0A0U1RRK4 108 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 CXCL5P42830 114 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 UBE2E1P51965 193 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 RPL39P62891 51 aaKnown RBP4.85□□□□□ -1.63
CCDC6-202ENST00000491922 FAM19A5Q7Z5A7 132 aaPredicted RBP4.85□□□□□ -1.63
CCDC6-202ENST00000491922 TMEM219Q86XT9 240 aa4.85□□□□□ -1.63
CCDC6-202ENST00000491922 DSPP15924 2871 aaKnown RBP4.85□□□□□ -1.63
CCDC6-202ENST00000491922 IGFL2Q6UWQ7 119 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 DPM3Q9P2X0 92 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 ZGRF1Q86YA3 2104 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 ZNF292O60281 2723 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 NXPH4O95158 308 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 COX7CP15954 63 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 ZNF22P17026 224 aaPredicted RBP4.84□□□□□ -1.63
CCDC6-202ENST00000491922 FAM27E3Q08E93 113 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 C22orf34Q6ZV56 151 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 FDCSPQ8NFU4 85 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 LINC00477Q96M19 166 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 LINC00527Q9UJ94 153 aa4.84□□□□□ -1.63
CCDC6-202ENST00000491922 WDFY4Q6ZS81 3184 aa4.84□□□□□ -1.64
CCDC6-202ENST00000491922 IGHV3-35A0A0C4DH35 117 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 CRYGAP11844 174 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 NDPQ00604 133 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 CEMP1Q6PRD7 247 aaPredicted RBP4.83□□□□□ -1.64
CCDC6-202ENST00000491922 FAM215AQ9Y5M1 114 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 KIF25-AS1Q9Y6Z4 181 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 IGHV3-66A0A0C4DH42 116 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 TRBV27A0A0K0K1C4 114 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 CLPSL1A2RUU4 121 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 RHOHQ15669 191 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 GAGE2AQ6NT46 116 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 C9orf139Q6ZV77 190 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 ZFAND2AQ8N6M9 145 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 CLEC2BQ92478 149 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 RNASE6Q93091 150 aaKnown RBP4.83□□□□□ -1.64
CCDC6-202ENST00000491922 C16orf92Q96LL3 132 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 LITAFQ99732 161 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 DYNLRB1Q9NP97 96 aa4.83□□□□□ -1.64
CCDC6-202ENST00000491922 PRRC2CQ9Y520 2896 aaKnown RBP4.83□□□□□ -1.64
CCDC6-202ENST00000491922 TRBV6-5A0A0K0K1A5 114 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 I3L3M4 83 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 SPRY2O43597 315 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 LINC00315P59091 139 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 NSUN5P1Q3KNT7 163 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 ANKRD11Q6UB99 2663 aaPredicted RBP4.82□□□□□ -1.64
CCDC6-202ENST00000491922 OVOL1O14753 267 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 PRSS2P07478 247 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 RNASE3P12724 160 aaKnown RBP4.82□□□□□ -1.64
CCDC6-202ENST00000491922 BSPH1Q075Z2 132 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 MIAQ16674 131 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 C15orf32Q32M92 178 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 SDIM1Q6ZPB5 146 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 DCANP1Q8TF63 244 aa4.82□□□□□ -1.64
CCDC6-202ENST00000491922 ITLN2Q8WWU7 325 aaPredicted RBP4.82□□□□□ -1.64
CCDC6-202ENST00000491922 IGHV3-64A0A075B6Q5 118 aa4.81□□□□□ -1.64
CCDC6-202ENST00000491922 TRAV8-3A0A0A6YYJ7 113 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms