RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 Q8N1Y9 231 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-219ENST00000491747 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-219ENST00000491747 IGLC6P0CF74 106 aa7.01□□□□□ -1.29
BRCA1-219ENST00000491747 FXYD7P58549 80 aa7.01□□□□□ -1.29
BRCA1-219ENST00000491747 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
BRCA1-219ENST00000491747 NDUFA4O00483 81 aa7.01□□□□□ -1.29
BRCA1-219ENST00000491747 ZNF207O43670 478 aaKnown RBP7.01□□□□□ -1.29
BRCA1-219ENST00000491747 TCTAP57738 103 aa7.01□□□□□ -1.29
BRCA1-219ENST00000491747 PCP2Q8IVA1 136 aa7.01□□□□□ -1.29
BRCA1-219ENST00000491747 NXT2Q9NPJ8 142 aaKnown RBP7.01□□□□□ -1.29
BRCA1-219ENST00000491747 SPCS1Q9Y6A9 102 aa7.01□□□□□ -1.29
BRCA1-219ENST00000491747 SMKR1H3BMG3 65 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 FABP2P12104 132 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 RAB37Q96AX2 223 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 CNFNQ9BYD5 112 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 DKK2Q9UBU2 259 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 LINC01546A6NGU7 62 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 Q8TAT8 98 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 DYNLRB2Q8TF09 96 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 C18orf15Q96N68 181 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 HIGD1BQ9P298 99 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 UFC1Q9Y3C8 167 aa7□□□□□ -1.29
BRCA1-219ENST00000491747 FABP5P3A8MUU1 101 aa6.99□□□□□ -1.29
BRCA1-219ENST00000491747 ORM1P02763 201 aa6.99□□□□□ -1.29
BRCA1-219ENST00000491747 SMIM13P0DJ93 91 aa6.99□□□□□ -1.29
BRCA1-219ENST00000491747 FCER1GP30273 86 aa6.99□□□□□ -1.29
BRCA1-219ENST00000491747 NEGR1Q7Z3B1 354 aa6.99□□□□□ -1.29
BRCA1-219ENST00000491747 TMEM61Q8N0U2 210 aa6.99□□□□□ -1.29
BRCA1-219ENST00000491747 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
BRCA1-219ENST00000491747 K7EMT4 169 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 PRSS1P07477 247 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 SMIM17P0DL12 118 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 LEPP41159 167 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 ZNF80P51504 273 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-219ENST00000491747 ODF1Q14990 250 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 WFDC3Q8IUB2 231 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 B9D2Q9BPU9 175 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 ZFAND3Q9H8U3 227 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 DAZ1Q9NQZ3 744 aaKnown RBP6.98□□□□□ -1.29
BRCA1-219ENST00000491747 SMPXQ9UHP9 88 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 SMAD5-AS1Q9Y6J3 95 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 IGHV3-49A0A0A0MS15 119 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 ATP5LO75964 103 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 TNFRSF6BO95407 300 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 CD7P09564 240 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 GCSHP23434 173 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 VGLL1Q99990 258 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 ZMAT4Q9H898 229 aa6.98□□□□□ -1.29
BRCA1-219ENST00000491747 IGKCP01834 107 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 HHLA3Q9XRX5 114 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 IGHV3OR16-13A0A075B7E8 117 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 IGHV3-74A0A0B4J1X5 117 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 IGHV4-30-4P0DP06 118 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 EVI2AP22794 236 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 CHAC1Q9BUX1 264 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 WFDC10AQ9H1F0 79 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 MSRB1Q9NZV6 116 aa6.97□□□□□ -1.29
BRCA1-219ENST00000491747 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.29
BRCA1-219ENST00000491747 DPM2O94777 84 aa6.96□□□□□ -1.29
BRCA1-219ENST00000491747 SBSPONQ8IVN8 264 aa6.96□□□□□ -1.29
BRCA1-219ENST00000491747 C19orf73Q9NVV2 129 aa6.96□□□□□ -1.29
BRCA1-219ENST00000491747 IGKV2D-26A0A0A0MRZ7 120 aa6.96□□□□□ -1.3
BRCA1-219ENST00000491747 HLA-DRB4P13762 266 aa6.96□□□□□ -1.3
BRCA1-219ENST00000491747 RHPN1-AS1Q9BWJ2 59 aa6.96□□□□□ -1.3
BRCA1-219ENST00000491747 HLA-DRB4X5D2U9 266 aa6.96□□□□□ -1.3
BRCA1-219ENST00000491747 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
BRCA1-219ENST00000491747 TRBV25-1A0A075B6N4 114 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 IGHV3-66A0A0C4DH42 116 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 FXYD2P54710 66 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 IGFL4Q6B9Z1 124 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 GTSCR1Q86UQ5 136 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 ZNF575Q86XF7 245 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 Q8N8P6 123 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 TRAV25A0A0B4J276 109 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 A8MZ25 164 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 HLA-DMBP28068 263 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 SLC50A1Q9BRV3 221 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
BRCA1-219ENST00000491747 GAS8-AS1O95177 125 aa6.94□□□□□ -1.3
BRCA1-219ENST00000491747 CEND1Q8N111 149 aa6.94□□□□□ -1.3
BRCA1-219ENST00000491747 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
BRCA1-219ENST00000491747 IGKV3-7A0A075B6H7 116 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 OR11H12B2RN74 326 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 BUB3O43684 328 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 RPL24P83731 157 aaKnown RBP6.93□□□□□ -1.3
BRCA1-219ENST00000491747 ERCC8Q13216 396 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 LAGE3Q14657 143 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 TAL2Q16559 108 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 U3KQE9 123 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 IGLV2-18A0A075B6J9 118 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 RBMY1BA6NDE4 496 aaKnown RBP6.93□□□□□ -1.3
BRCA1-219ENST00000491747 RBMY1EA6NEQ0 496 aaKnown RBP6.93□□□□□ -1.3
BRCA1-219ENST00000491747 PRSS47A8MTI9 375 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms