RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 UTRNP46939 3433 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 UBE2E1P51965 193 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 PIP4P2Q8N4L2 257 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 IGFBPL1Q8WX77 278 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 SYNJ2BPP57105 145 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 PEMTQ9UBM1 199 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 A0A1B0GX51 115 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 CCL21O00585 134 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 Q6ZQT7 251 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 A0A0G2JNJ9 132 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 SPRY4Q9C004 299 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 Q9UFV3 132 aa8.65□□□□□ -1.02
CRNKL1-204ENST00000490910 F6UB75 175 aa8.65□□□□□ -1.03
CRNKL1-204ENST00000490910 M0QXV9 152 aa8.65□□□□□ -1.03
CRNKL1-204ENST00000490910 SOCS3O14543 225 aa8.65□□□□□ -1.03
CRNKL1-204ENST00000490910 LINC00158P58513 81 aa8.65□□□□□ -1.03
CRNKL1-204ENST00000490910 HERVK_113P63121 156 aa8.65□□□□□ -1.03
CRNKL1-204ENST00000490910 TMEM219Q86XT9 240 aa8.65□□□□□ -1.03
CRNKL1-204ENST00000490910 TRIAP1O43715 76 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 LY6HO94772 140 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 Q6ZS46 218 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 FAM215AQ9Y5M1 114 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 CRYGBP07316 175 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 NPBQ8NG41 125 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 ADAMTS20P59510 1910 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
CRNKL1-204ENST00000490910 FAM223BA6NKX1 122 aa8.63□□□□□ -1.03
CRNKL1-204ENST00000490910 NDUFA7O95182 113 aa8.63□□□□□ -1.03
CRNKL1-204ENST00000490910 PRR30Q53SZ7 412 aaPredicted RBP8.63□□□□□ -1.03
CRNKL1-204ENST00000490910 FAM223AQ8IWN6 122 aa8.63□□□□□ -1.03
CRNKL1-204ENST00000490910 DYNLRB2Q8TF09 96 aa8.63□□□□□ -1.03
CRNKL1-204ENST00000490910 A0A0J9YXY3 114 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 PAX4O43316 350 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 IGHV3-30-3P0DP02 117 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 LINC01587Q99440 93 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 CRLF1O75462 422 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 CRIP2P52943 208 aaPredicted RBP8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 DNAJC30Q96LL9 226 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
CRNKL1-204ENST00000490910 KLK9Q9UKQ9 250 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 OVOL3O00110 214 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 DAZ1Q9NQZ3 744 aaKnown RBP8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 IGHV1OR15-1A0A075B7D0 117 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 IGHV7-81A0A0B4J1V7 117 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 IGHV1-69P01742 117 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 DAND5Q8N907 189 aa8.61□□□□□ -1.03
CRNKL1-204ENST00000490910 AJUBAQ96IF1 538 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 PTPRBP23467 1997 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 NDUFA4O00483 81 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 LINC00694P0DN24 101 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 Q9H8V8 135 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 SMAD5-AS1Q9Y6J3 95 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 SAA4P35542 130 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 USMG5Q96IX5 58 aa8.6□□□□□ -1.03
CRNKL1-204ENST00000490910 DEFB123Q8N688 67 aa8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 IGHV7-4-1A0A0J9YVY3 117 aa8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 IGLV2-18A0A075B6J9 118 aa8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 TRAV13-2A0A0B4J235 113 aa8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 MIAQ16674 131 aa8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 TMEM263Q8WUH6 116 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 JPT2Q9H910 190 aa8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 ANKHD1Q8IWZ3 2542 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-204ENST00000490910 SEM1Q6ZVN7 128 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 TMEM86BQ8N661 226 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 DEFB1P60022 68 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 C1orf43Q9BWL3 253 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 VPREB3Q9UKI3 123 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 TINCRA0A1B0GVN0 87 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 ZNF415Q09FC8 603 aa8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 RBMY1FQ15415 496 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-204ENST00000490910 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
CRNKL1-204ENST00000490910 hADV29S1A0JD25 119 aa8.57□□□□□ -1.04
CRNKL1-204ENST00000490910 COX8CQ7Z4L0 72 aa8.57□□□□□ -1.04
CRNKL1-204ENST00000490910 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
CRNKL1-204ENST00000490910 H7C423 109 aa8.57□□□□□ -1.04
CRNKL1-204ENST00000490910 LRRC75A-AS1Q8N1F1 130 aa8.57□□□□□ -1.04
CRNKL1-204ENST00000490910 IGHV3-38A0A0C4DH36 116 aa8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 HOXD3P31249 432 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 UBL5Q9BZL1 73 aa8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 CEP192Q8TEP8 1941 aa8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms