RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CXCL1P09341 107 aa11.8□□□□□ -0.52
SEC13-218ENST00000490283 RPL35P42766 123 aaKnown RBP11.8□□□□□ -0.52
SEC13-218ENST00000490283 SULT1A2P50226 295 aa11.8□□□□□ -0.52
SEC13-218ENST00000490283 UFSP1Q6NVU6 142 aa11.8□□□□□ -0.52
SEC13-218ENST00000490283 SLC51BQ86UW2 128 aa11.8□□□□□ -0.52
SEC13-218ENST00000490283 A0A087WWC5 75 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 IGHV3-30P01768 117 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 IGHV3-33P01772 117 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 C1QBP02746 253 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 IGHV3-30-3P0DP02 117 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 IGHV3-30-5P0DP03 117 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 CDPF1Q6NVV7 123 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 C14orf178Q8N769 122 aaPredicted RBP11.79□□□□□ -0.52
SEC13-218ENST00000490283 MLST8Q9BVC4 326 aa11.79□□□□□ -0.52
SEC13-218ENST00000490283 CCL20P78556 96 aa11.78□□□□□ -0.52
SEC13-218ENST00000490283 RPL19P84098 196 aaKnown RBP11.78□□□□□ -0.52
SEC13-218ENST00000490283 C11orf52Q96A22 123 aa11.78□□□□□ -0.52
SEC13-218ENST00000490283 A0A087WTM6 91 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 PDE6DO43924 150 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 Q6ZNX1 250 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 AKAP14Q86UN6 197 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 DAZAP1Q96EP5 407 aaKnown RBP11.77□□□□□ -0.53
SEC13-218ENST00000490283 Q9HAA7 133 aa11.77□□□□□ -0.53
SEC13-218ENST00000490283 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
SEC13-218ENST00000490283 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
SEC13-218ENST00000490283 CENPWQ5EE01 88 aa11.76□□□□□ -0.53
SEC13-218ENST00000490283 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
SEC13-218ENST00000490283 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
SEC13-218ENST00000490283 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
SEC13-218ENST00000490283 LAGE3Q14657 143 aa11.75□□□□□ -0.53
SEC13-218ENST00000490283 ZNF56Q15929 161 aa11.75□□□□□ -0.53
SEC13-218ENST00000490283 TOR2AQ5JU69 321 aa11.75□□□□□ -0.53
SEC13-218ENST00000490283 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
SEC13-218ENST00000490283 DERL1Q9BUN8 251 aa11.75□□□□□ -0.53
SEC13-218ENST00000490283 SNAI2O43623 268 aa11.74□□□□□ -0.53
SEC13-218ENST00000490283 OR5AL1P0C617 328 aa11.74□□□□□ -0.53
SEC13-218ENST00000490283 TAGLN2P37802 199 aaKnown RBP11.74□□□□□ -0.53
SEC13-218ENST00000490283 GNG4P50150 75 aa11.74□□□□□ -0.53
SEC13-218ENST00000490283 MAPKAPK5-AS1Q8N8E1 139 aa11.74□□□□□ -0.53
SEC13-218ENST00000490283 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.74□□□□□ -0.53
SEC13-218ENST00000490283 SMIM12Q96EX1 92 aa11.74□□□□□ -0.53
SEC13-218ENST00000490283 TM2D2Q9BX73 214 aa11.74□□□□□ -0.53
SEC13-218ENST00000490283 hCG_2014768A0A024R1R8 64 aa11.73□□□□□ -0.53
SEC13-218ENST00000490283 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
SEC13-218ENST00000490283 BCL2P10415 239 aa11.73□□□□□ -0.53
SEC13-218ENST00000490283 RPS20P60866 119 aaKnown RBP11.73□□□□□ -0.53
SEC13-218ENST00000490283 RAB4BP61018 213 aa11.73□□□□□ -0.53
SEC13-218ENST00000490283 KCNIP4Q6PIL6 250 aa11.73□□□□□ -0.53
SEC13-218ENST00000490283 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
SEC13-218ENST00000490283 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
SEC13-218ENST00000490283 TRBV7-3A0A075B6L6 115 aa11.72□□□□□ -0.53
SEC13-218ENST00000490283 TRAV8-3A0A0A6YYJ7 113 aa11.72□□□□□ -0.53
SEC13-218ENST00000490283 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
SEC13-218ENST00000490283 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
SEC13-218ENST00000490283 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
SEC13-218ENST00000490283 SSBP4Q9BWG4 385 aaPredicted RBP11.72□□□□□ -0.53
SEC13-218ENST00000490283 Q9UF83 564 aa11.72□□□□□ -0.53
SEC13-218ENST00000490283 VAX2Q9UIW0 290 aa11.72□□□□□ -0.53
SEC13-218ENST00000490283 MUC21A0A0G2JKD1 596 aa11.71□□□□□ -0.53
SEC13-218ENST00000490283 MUC21A0A140T8X8 626 aa11.71□□□□□ -0.53
SEC13-218ENST00000490283 F5H697 171 aa11.71□□□□□ -0.53
SEC13-218ENST00000490283 SSTP61278 116 aa11.71□□□□□ -0.53
SEC13-218ENST00000490283 OR2D3Q8NGH3 330 aa11.71□□□□□ -0.53
SEC13-218ENST00000490283 KRTAP17-1Q9BYP8 105 aa11.7□□□□□ -0.54
SEC13-218ENST00000490283 A0A087WX48 190 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 RAB19A4D1S5 217 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 P01737 135 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
SEC13-218ENST00000490283 UBE2D3P61077 147 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 UBE2D2P62837 147 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 C9orf62Q8N4C0 152 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 FER1L6-AS1Q8NA97 138 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
SEC13-218ENST00000490283 IGLV2-8P01709 118 aa11.68□□□□□ -0.54
SEC13-218ENST00000490283 ELOBQ15370 118 aa11.68□□□□□ -0.54
SEC13-218ENST00000490283 DAZ4Q86SG3 579 aaKnown RBP11.68□□□□□ -0.54
SEC13-218ENST00000490283 NTN5Q8WTR8 489 aaPredicted RBP11.68□□□□□ -0.54
SEC13-218ENST00000490283 RMI2Q96E14 147 aa11.68□□□□□ -0.54
SEC13-218ENST00000490283 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
SEC13-218ENST00000490283 DAZ3Q9NR90 486 aaKnown RBP11.68□□□□□ -0.54
SEC13-218ENST00000490283 COX11Q9Y6N1 276 aa11.68□□□□□ -0.54
SEC13-218ENST00000490283 RYR1P21817 5038 aa11.67□□□□□ -0.54
SEC13-218ENST00000490283 IGLV5-52A0A0A0MRZ9 124 aa11.67□□□□□ -0.54
SEC13-218ENST00000490283 CACNG7P62955 275 aa11.67□□□□□ -0.54
SEC13-218ENST00000490283 BLOC1S1P78537 153 aa11.67□□□□□ -0.54
SEC13-218ENST00000490283 NIT1Q86X76 327 aa11.67□□□□□ -0.54
SEC13-218ENST00000490283 Q8N3U1 123 aa11.67□□□□□ -0.54
SEC13-218ENST00000490283 LRP1BQ9NZR2 4599 aa11.67□□□□□ -0.54
SEC13-218ENST00000490283 C19orf71A6NCJ1 209 aa11.66□□□□□ -0.54
SEC13-218ENST00000490283 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
SEC13-218ENST00000490283 GZMBP10144 247 aa11.66□□□□□ -0.54
SEC13-218ENST00000490283 GCSHP23434 173 aa11.66□□□□□ -0.54
SEC13-218ENST00000490283 NEXN-AS1Q8NBZ9 246 aa11.66□□□□□ -0.54
SEC13-218ENST00000490283 RBFOX3A6NFN3 312 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 F2Z2F3 143 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 H7C1H1 209 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms