RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 IGHV3-53P01767 116 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 PRB4P10163 310 aaPredicted RBP1.82□□□□□ -2.12
RBM28-207ENST00000488249 UBE2G1P62253 170 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 ZNF816Q0VGE8 651 aaPredicted RBP1.82□□□□□ -2.12
RBM28-207ENST00000488249 UBE2SQ16763 222 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 DEFB116Q30KQ4 102 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 LGALSLQ3ZCW2 172 aaPredicted RBP1.82□□□□□ -2.12
RBM28-207ENST00000488249 Q5W150 140 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 C18orf32Q8TCD1 76 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 TRGV9Q99603 122 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 SCRT1Q9BWW7 348 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 NXT2Q9NPJ8 142 aaKnown RBP1.82□□□□□ -2.12
RBM28-207ENST00000488249 C14orf132Q9NPU4 83 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 KIF1AQ12756 1690 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 MAP2P11137 1827 aaKnown RBP1.82□□□□□ -2.12
RBM28-207ENST00000488249 ATP10BO94823 1461 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 PTPRMP28827 1452 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 CDK12Q9NYV4 1490 aaPredicted RBP1.82□□□□□ -2.12
RBM28-207ENST00000488249 CDK13Q14004 1512 aaKnown RBP1.81□□□□□ -2.12
RBM28-207ENST00000488249 DUOX2Q9NRD8 1548 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 KIAA1549Q9HCM3 1950 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 MYO3AQ8NEV4 1616 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 RAPGEF6Q8TEU7 1601 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 MALRD1Q5VYJ5 2156 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 MUC4Q99102 2169 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 TNS1Q9HBL0 1735 aaKnown RBP1.81□□□□□ -2.12
RBM28-207ENST00000488249 TRAV2A0A0B4J234 112 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 PIGBOS1A0A0B4J2F0 54 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 IGHV1-18A0A0C4DH31 117 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 C7orf77A4D0Y5 90 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 C16orf90A8MZG2 172 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 IGLV7-43P04211 117 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 IL4P05112 153 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 MPV17LQ2QL34 196 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 SLC48A1Q6P1K1 146 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 CASC2Q6XLA1 102 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 TMEM136Q6ZRR5 245 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 Q6ZS52 159 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 ZCCHC23Q6ZST2 131 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 CYB561D1Q8N8Q1 229 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 MUCL1Q96DR8 90 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 C20orf166-AS1Q96NR2 134 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 ODF3Q96PU9 254 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 HIGD1BQ9P298 99 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 MINOS1-NBL1R4GNA1 71 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 PLXNA2O75051 1894 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 LCTP09848 1927 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 SCN3AQ9NY46 2000 aa1.81□□□□□ -2.12
RBM28-207ENST00000488249 LRP5O75197 1615 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 CLTCQ00610 1675 aaKnown RBP1.8□□□□□ -2.12
RBM28-207ENST00000488249 UBR1Q8IWV7 1749 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 KDM3BQ7LBC6 1761 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 MGAMO43451 1857 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 TRPM7Q96QT4 1865 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 EML5Q05BV3 1969 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 NUP214P35658 2090 aaPredicted RBP1.8□□□□□ -2.12
RBM28-207ENST00000488249 IGLV4-60A0A075B6I1 120 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 A0A087WWC5 75 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 KANTRA0A1W2PQU2 76 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 ASAH2BP0C7U1 165 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 DSCR4P56555 118 aaPredicted RBP1.8□□□□□ -2.12
RBM28-207ENST00000488249 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 PMCHL1Q16048 86 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
RBM28-207ENST00000488249 RPL7L1Q6DKI1 246 aaKnown RBP1.8□□□□□ -2.12
RBM28-207ENST00000488249 LYPD5Q6UWN5 251 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 Q8NAQ8 132 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 CMTM2Q8TAZ6 248 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 NRXN1Q9ULB1 1477 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 TIAM1Q13009 1591 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 DIP2CQ9Y2E4 1556 aa1.8□□□□□ -2.12
RBM28-207ENST00000488249 MUC22E2RYF6 1773 aaPredicted RBP1.8□□□□□ -2.12
RBM28-207ENST00000488249 PCNX2A6NKB5 2137 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 A0A087WSZ3 146 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 TRAV13-2A0A0B4J235 113 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 TRBV10-3A0A0K0K1G6 114 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 A0A1B0GU33 70 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 E7EUB6 86 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 H7BZZ5 65 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 NDUFC1O43677 76 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 P0C880 135 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 EFNA4P52798 201 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 CFAP126Q5VTH2 177 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 CYP2G1PQ6ZSU1 146 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 ZNF826PQ6ZT77 177 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 LYPD6Q86Y78 171 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 ST20-AS1Q8NBB2 130 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 ABCC1P33527 1531 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 URB2Q14146 1524 aaKnown RBP1.79□□□□□ -2.12
RBM28-207ENST00000488249 ZMYM4Q5VZL5 1548 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 UNC13BO14795 1591 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 RGPD2P0DJD1 1756 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 ARFGEF2Q9Y6D5 1785 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 TANC1Q9C0D5 1861 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 EXPH5Q8NEV8 1989 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 KIAA2026Q5HYC2 2103 aa1.79□□□□□ -2.12
RBM28-207ENST00000488249 DIDO1Q9BTC0 2240 aaKnown RBP1.78□□□□□ -2.12
RBM28-207ENST00000488249 NUMA1Q14980 2115 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms