RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZNF688P0C7X2 276 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 NTF3P20783 257 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 ASIPP42127 132 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 DEFB131AP59861 70 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 ZNF575Q86XF7 245 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 KIR2DL5AQ8N109 375 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 OR11H2Q8NH07 326 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 KIR2DL5BQ8NHK3 375 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 C7orf71A4D174 169 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 ZNF324O75467 553 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 HSBP1O75506 76 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 GIG44P09565 113 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 ZNF705DP0CH99 300 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 ZNF705BP0CI00 300 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 PRB4P10163 310 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 RNASE4P34096 147 aaKnown RBP6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 LINC00310P59036 64 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 IQCJQ1A5X6 159 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 TDRG1Q3Y452 100 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 PYY3Q5JQD4 70 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 ORMDL3Q8N138 153 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 C11orf21Q9P2W6 132 aa6.78□□□□□ -1.32
TMEM39A-208ENST00000486159 KNCNA6PVL3 124 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 F6UB75 175 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 NUPR1O60356 82 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 HLA-DRB4P13762 266 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 S100A4P26447 101 aaKnown RBP6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 CDKN1BP46527 198 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 AMTP48728 403 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 PRR9Q5T870 116 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 FAM159AQ6UWV7 190 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 NIT1Q86X76 327 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 SCRT2Q9NQ03 307 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 NIT2Q9NQR4 276 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 HLA-DRB4X5D2U9 266 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 DNAH6Q9C0G6 4158 aa6.77□□□□□ -1.33
TMEM39A-208ENST00000486159 KIAA1109Q2LD37 5005 aa6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 LINC00614P0C842 121 aa6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 RBMY1CP0DJD4 496 aa6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 RBMY1FQ15415 496 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 SPANXN1Q5VSR9 72 aa6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 C11orf45Q8TAV5 145 aa6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 C20orf144Q9BQM9 153 aa6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 KLK5Q9Y337 293 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-208ENST00000486159 H3BMM0 161 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 NXPH4O95158 308 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 PPP1R17O96001 155 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 CKS2P33552 79 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 ANXA2RQ3ZCQ2 193 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 MRPL51Q4U2R6 128 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 RNASEKQ6P5S7 137 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 AMTNQ6UX39 209 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 Q8NAQ8 132 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 MRAP2Q96G30 205 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 NAGKQ9UJ70 344 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 PHLDA3Q9Y5J5 127 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
TMEM39A-208ENST00000486159 TRGV11A0A075B6L2 103 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 PRSS47A8MTI9 375 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 D6R8Y8 96 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 H3BVH4 76 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 DEFB1P60022 68 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 FA2HQ7L5A8 372 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 TRPT1Q86TN4 253 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 OR10AG1Q8NH19 301 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 PRSS3P2Q8NHM4 247 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 LINC00467Q9BRT7 94 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 NXT2Q9NPJ8 142 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 APLNQ9ULZ1 77 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 X6R8D5 127 aa6.74□□□□□ -1.33
TMEM39A-208ENST00000486159 IGHV1OR15-1A0A075B7D0 117 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 IGHV4-28A0A0C4DH34 117 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 IGLL5B9A064 214 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 J3KRW8 73 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 M0R2Z0 102 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 PIK3CD-AS1Q5SR53 167 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 SYT8Q8NBV8 401 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 RNF185Q96GF1 192 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 AP1S3Q96PC3 154 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 C11orf68Q9H3H3 251 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 MAP1LC3AQ9H492 121 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 DPH3P1Q9H4G8 78 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 GSN-AS1Q9NRJ2 163 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 CELA1Q9UNI1 258 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 FAT2Q9NYQ8 4349 aa6.73□□□□□ -1.33
TMEM39A-208ENST00000486159 DYNC1H1Q14204 4646 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 DNAH17Q9UFH2 4485 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 TRAV12-3A0A0B4J271 114 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 LINC01546A6NGU7 62 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 K7EMI3 77 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 M0R381 172 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 SCGB1D1O95968 90 aa6.72□□□□□ -1.33
TMEM39A-208ENST00000486159 RNASE3P12724 160 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms