RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 M0R2Z0 102 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 IGKV3-20P01619 116 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 ZNF124Q15973 351 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 MUC21Q5SSG8 566 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 FA2HQ7L5A8 372 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 NIT1Q86X76 327 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 AMN1Q8IY45 258 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 PRELID3AQ96N28 172 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 RCHY1Q96PM5 261 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 C11orf21Q9P2W6 132 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 LAMTOR2Q9Y2Q5 125 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 TIMM8BQ9Y5J9 83 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-216ENST00000484087 TRAV12-3A0A0B4J271 114 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 PCP4L1A6NKN8 68 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 D6R8Y8 96 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 HLA-DRB4P13762 266 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 LINC00310P59036 64 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 KIR3DS1Q14943 382 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 MRPL51Q4U2R6 128 aaKnown RBP5.09□□□□□ -1.59
BRCA1-216ENST00000484087 OR10AG1Q8NH19 301 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 HLA-DRB4X5D2U9 266 aa5.09□□□□□ -1.59
BRCA1-216ENST00000484087 TRGV11A0A075B6L2 103 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 OR11H12B2RN74 326 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 M0R381 172 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 SMIM17P0DL12 118 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 SPINK13Q1W4C9 94 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 TDRG1Q3Y452 100 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 GTSCR1Q86UQ5 136 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 ZNF575Q86XF7 245 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 SYT8Q8NBV8 401 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 OR2K2Q8NGT1 345 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 AP1S3Q96PC3 154 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 MAP1LC3AQ9H492 121 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 MAP6D1Q9H9H5 199 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 C19orf73Q9NVV2 129 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 U3KQK5 164 aa5.08□□□□□ -1.6
BRCA1-216ENST00000484087 IGHV1OR15-1A0A075B7D0 117 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 RBMY1BA6NDE4 496 aaKnown RBP5.07□□□□□ -1.6
BRCA1-216ENST00000484087 RBMY1EA6NEQ0 496 aaKnown RBP5.07□□□□□ -1.6
BRCA1-216ENST00000484087 KNCNA6PVL3 124 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 TSTD3H0UI37 97 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 H3BMM0 161 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 GNRH2O43555 120 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 LEPROTL1O95214 131 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 PPP1R17O96001 155 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 RBMY1DP0C7P1 496 aaKnown RBP5.07□□□□□ -1.6
BRCA1-216ENST00000484087 KRTDAPP60985 99 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 Q6ZWC4 215 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 STHQ8IWL8 128 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 FAM19A2Q8N3H0 131 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 MRAP2Q96G30 205 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 DPH3P1Q9H4G8 78 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 MSRB1Q9NZV6 116 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 ZMAT5Q9UDW3 170 aaKnown RBP5.07□□□□□ -1.6
BRCA1-216ENST00000484087 HSPB8Q9UJY1 196 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 TRAV12-2A0A075B6T6 113 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 LOC389332A0A1B0GUA5 103 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 A8MTW9 85 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 EVI2AP22794 236 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 NUTF2P61970 127 aaKnown RBP5.07□□□□□ -1.6
BRCA1-216ENST00000484087 AMTNQ6UX39 209 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 Q6ZQT7 251 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 RNF185Q96GF1 192 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 C20orf144Q9BQM9 153 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 NXT2Q9NPJ8 142 aaKnown RBP5.07□□□□□ -1.6
BRCA1-216ENST00000484087 SCRT2Q9NQ03 307 aa5.07□□□□□ -1.6
BRCA1-216ENST00000484087 IGHV1-24A0A0C4DH33 117 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 C20orf202A1L168 122 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 CBY3A6NI87 242 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 TNFRSF6BO95407 300 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 NCR2O95944 276 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 NPYP01303 97 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 INSP01308 110 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 RNASE3P12724 160 aaKnown RBP5.06□□□□□ -1.6
BRCA1-216ENST00000484087 BTF3P20290 206 aaKnown RBP5.06□□□□□ -1.6
BRCA1-216ENST00000484087 IFI27P40305 119 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-216ENST00000484087 PKIAP61925 76 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 ODF3L2Q3SX64 289 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 LYSTQ99698 3801 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 TM2D3Q9BRN9 247 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 MAP1LC3CQ9BXW4 147 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 AGRNO00468 2067 aa5.06□□□□□ -1.6
BRCA1-216ENST00000484087 RYR2Q92736 4967 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 SACSQ9NZJ4 4579 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 IGHV3-16A0A0C4DH30 117 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 SMKR1H3BMG3 65 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 NXPH4O95158 308 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 HBDP02042 147 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 MGPP08493 103 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 C3orf79P0CE67 100 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 RPL35AP18077 110 aaKnown RBP5.05□□□□□ -1.6
BRCA1-216ENST00000484087 FXYD7P58549 80 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 ZFAND6Q6FIF0 208 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 URB1-AS1Q96HZ7 61 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 WWC2-AS2Q96NR7 200 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 TMEM70Q9BUB7 260 aa5.05□□□□□ -1.6
BRCA1-216ENST00000484087 GSN-AS1Q9NRJ2 163 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms