RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 LY96Q9Y6Y9 160 aa9.49□□□□□ -0.89
VARS-225ENST00000482996 GRIFINA4D1Z8 144 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 ARMS2P0C7Q2 107 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 EVI2AP22794 236 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 LINC00315P59091 139 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 BAGE2Q86Y30 109 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 SVBPQ8N300 66 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
VARS-225ENST00000482996 TMSB15BA0A087X1C1 80 aa9.47□□□□□ -0.89
VARS-225ENST00000482996 C9JQL5 133 aa9.47□□□□□ -0.89
VARS-225ENST00000482996 K7EP13 123 aa9.47□□□□□ -0.89
VARS-225ENST00000482996 MED14OSP0DP75 135 aa9.47□□□□□ -0.89
VARS-225ENST00000482996 GNG4P50150 75 aa9.47□□□□□ -0.89
VARS-225ENST00000482996 WFDC10BQ8IUB3 73 aa9.47□□□□□ -0.89
VARS-225ENST00000482996 RHODO00212 210 aa9.46□□□□□ -0.9
VARS-225ENST00000482996 SNAPINO95295 136 aa9.46□□□□□ -0.9
VARS-225ENST00000482996 RPL35P42766 123 aaKnown RBP9.46□□□□□ -0.9
VARS-225ENST00000482996 PNRC1Q12796 327 aaPredicted RBP9.46□□□□□ -0.9
VARS-225ENST00000482996 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
VARS-225ENST00000482996 NFE4Q86UQ8 179 aa9.46□□□□□ -0.9
VARS-225ENST00000482996 ZNF575Q86XF7 245 aa9.46□□□□□ -0.9
VARS-225ENST00000482996 NAT8Q9UHE5 227 aa9.46□□□□□ -0.9
VARS-225ENST00000482996 CARHSP1Q9Y2V2 147 aaKnown RBP9.46□□□□□ -0.9
VARS-225ENST00000482996 TRAV8-6A0A0B4J262 113 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 DNAH10OSP0CZ25 163 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 ADIRFQ15847 76 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 TMEM241Q24JQ0 296 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 ZFP82Q8N141 532 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 SCRT2Q9NQ03 307 aa9.45□□□□□ -0.9
VARS-225ENST00000482996 M0R381 172 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 CRYGDP07320 174 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 ADCYAP1P18509 176 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 CENPWQ5EE01 88 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 OR10J3Q5JRS4 329 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 DERL1Q9BUN8 251 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 MLST8Q9BVC4 326 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 JPT2Q9H910 190 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 BIN3Q9NQY0 253 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 KIAA1109Q2LD37 5005 aa9.44□□□□□ -0.9
VARS-225ENST00000482996 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 CXCL1P09341 107 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 LELP1Q5T871 98 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 FAM74A4Q5TZK3 123 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 PRR27Q6MZM9 219 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 Q6ZSN1 163 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 SPATA12Q7Z6I5 190 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 SFRP2Q96HF1 295 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 SAMD10Q9BYL1 202 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 MSRB1Q9NZV6 116 aa9.43□□□□□ -0.9
VARS-225ENST00000482996 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 EREGO14944 169 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 RPL19P84098 196 aaKnown RBP9.42□□□□□ -0.9
VARS-225ENST00000482996 GAGE1Q13065 139 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 GAGE4Q13068 117 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 GAGE5Q13069 117 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 Q6ZRN7 208 aaPredicted RBP9.42□□□□□ -0.9
VARS-225ENST00000482996 SMIM12Q96EX1 92 aa9.42□□□□□ -0.9
VARS-225ENST00000482996 A0A087WWL8 130 aa9.41□□□□□ -0.9
VARS-225ENST00000482996 ERVFC1-1P60608 527 aa9.41□□□□□ -0.9
VARS-225ENST00000482996 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
VARS-225ENST00000482996 C10orf91Q5T1B1 145 aa9.41□□□□□ -0.9
VARS-225ENST00000482996 C14orf178Q8N769 122 aaPredicted RBP9.41□□□□□ -0.9
VARS-225ENST00000482996 TNFRSF18Q9Y5U5 241 aa9.41□□□□□ -0.9
VARS-225ENST00000482996 LRP1BQ9NZR2 4599 aa9.41□□□□□ -0.9
VARS-225ENST00000482996 RHEBQ15382 184 aa9.4□□□□□ -0.9
VARS-225ENST00000482996 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.9
VARS-225ENST00000482996 DAZAP1Q96EP5 407 aaKnown RBP9.4□□□□□ -0.9
VARS-225ENST00000482996 MT-ND4LP03901 98 aa9.39□□□□□ -0.91
VARS-225ENST00000482996 LINC00694P0DN24 101 aa9.39□□□□□ -0.91
VARS-225ENST00000482996 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
VARS-225ENST00000482996 CLRN3Q8NCR9 226 aa9.39□□□□□ -0.91
VARS-225ENST00000482996 RPS10P5Q9NQ39 176 aa9.39□□□□□ -0.91
VARS-225ENST00000482996 A0A087WWC5 75 aa9.38□□□□□ -0.91
VARS-225ENST00000482996 PPP1R2P9O14990 202 aa9.38□□□□□ -0.91
VARS-225ENST00000482996 SNAI2O43623 268 aa9.38□□□□□ -0.91
VARS-225ENST00000482996 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
VARS-225ENST00000482996 SPANXN1Q5VSR9 72 aa9.38□□□□□ -0.91
VARS-225ENST00000482996 LINC01551Q86U37 167 aa9.38□□□□□ -0.91
VARS-225ENST00000482996 OR10AG1Q8NH19 301 aa9.38□□□□□ -0.91
VARS-225ENST00000482996 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
VARS-225ENST00000482996 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 KRTAP10-2P60368 255 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
VARS-225ENST00000482996 OCC1Q8TAD7 63 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 Q9UF83 564 aa9.37□□□□□ -0.91
VARS-225ENST00000482996 TRBV20OR9-2A0A075B6H5 130 aa9.36□□□□□ -0.91
VARS-225ENST00000482996 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
VARS-225ENST00000482996 C7orf77A4D0Y5 90 aa9.36□□□□□ -0.91
VARS-225ENST00000482996 IBA57-AS1B1ANH7 110 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms