RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CIB3Q96Q77 187 aaPredicted RBP2.66□□□□□ -1.98
UPF3A-207ENST00000481131 PBDC1Q9BVG4 233 aa2.66□□□□□ -1.98
UPF3A-207ENST00000481131 PIGBOS1A0A0B4J2F0 54 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 UBE2L5PA0A1B0GUS4 154 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 A0A1B0GXF2 115 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 RBFOX3A6NFN3 312 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 G3V3Q6 166 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 SMLR1H3BR10 107 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 MPC2O95563 127 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 C8orf88P0DMB2 117 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 INSL3P51460 131 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 TAS2R30P59541 319 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 PSG3Q16557 428 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 FAM24BQ8N5W8 94 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 C1orf64Q8NEQ6 169 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 OR2K2Q8NGT1 345 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 FXYD5Q96DB9 178 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 FMC1Q96HJ9 113 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 MGST2Q99735 147 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 RHPN1-AS1Q9BWJ2 59 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 SMIM3Q9BZL3 60 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 NMES1Q9C002 83 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 MED28Q9H204 178 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 LYRM2Q9NU23 88 aaPredicted RBP2.65□□□□□ -1.99
UPF3A-207ENST00000481131 DOK5Q9P104 306 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 CACFD1Q9UGQ2 172 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 SMPXQ9UHP9 88 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 UFC1Q9Y3C8 167 aa2.65□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF706Q9Y5V0 76 aaPredicted RBP2.65□□□□□ -1.99
UPF3A-207ENST00000481131 DNAH9Q9NYC9 4486 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 TRAV30A0A087WSZ9 112 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 A0A1B0GVG6 124 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 CXorf1O96002 111 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 PFN1P07737 140 aaKnown RBP2.64□□□□□ -1.99
UPF3A-207ENST00000481131 RD3LP0DJH9 198 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 PVALBP20472 110 aaPredicted RBP2.64□□□□□ -1.99
UPF3A-207ENST00000481131 FGF7P21781 194 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 NPPCP23582 126 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 CRYBB3P26998 211 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 SULT1A1P50225 295 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 DEFB1P60022 68 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
UPF3A-207ENST00000481131 BAXQ07812 192 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 DEFB121Q5J5C9 76 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 MIC13Q5XKP0 118 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 PATE2Q6UY27 113 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 CYP2G1PQ6ZSU1 146 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 TCF24Q7RTU0 167 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 TMEM144Q7Z5S9 345 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 DEFB125Q8N687 156 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 OR10P1Q8NGE3 313 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 OR5C1Q8NGR4 320 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 Q8WTZ3 238 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 BLNKQ8WV28 456 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 TRGV9Q99603 122 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 GINS3Q9BRX5 216 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 TMEM147Q9BVK8 224 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 VSIRQ9H7M9 311 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 MRPL27Q9P0M9 148 aaKnown RBP2.64□□□□□ -1.99
UPF3A-207ENST00000481131 HSPB11Q9Y547 144 aa2.64□□□□□ -1.99
UPF3A-207ENST00000481131 FXYD6-FXYD2A0A087WZ82 144 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 C9JQL5 133 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 H3BRN7 92 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 OR5G3P0C626 314 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 ORM2P19652 201 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 RPL12P30050 165 aaKnown RBP2.63□□□□□ -1.99
UPF3A-207ENST00000481131 EIF2B2P49770 351 aaKnown RBP2.63□□□□□ -1.99
UPF3A-207ENST00000481131 SPATA31B1PQ5VZV4 182 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 STX12Q86Y82 276 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 SBSPONQ8IVN8 264 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 LINC00304Q8N9R0 145 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF680Q8NEM1 530 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 OR2T35Q8NGX2 323 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 PPP1R14BQ96C90 147 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 SHANK2-AS3Q9BTD1 123 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 ARL6Q9H0F7 186 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 MS4A6AQ9H2W1 248 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 NPVFQ9HCQ7 196 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 UQCC1Q9NVA1 299 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 RABAC1Q9UI14 185 aa2.63□□□□□ -1.99
UPF3A-207ENST00000481131 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
UPF3A-207ENST00000481131 NBEAL2Q6ZNJ1 2754 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 TRAV5A0A0B4J249 113 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 OR4C46A6NHA9 309 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 KNCNA6PVL3 124 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 OR11H12B2RN74 326 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 FNDC10F2Z333 226 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 SLC17A3O00476 420 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 ISLRO14498 428 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 COX7A2P2O60397 106 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 PET100P0DJ07 73 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 INAFM2P0DMQ5 153 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 HLA-DMBP28068 263 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 S100A11P31949 105 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 AP2S1P53680 142 aaPredicted RBP2.62□□□□□ -1.99
UPF3A-207ENST00000481131 DEFB131AP59861 70 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 B2MP61769 119 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 HBG1P69891 147 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 HBG2P69892 147 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms