RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	SEC11C	Q9BY50	192 aa		10.83	□□□□□ -0.68
HDLBP-238	ENST00000479894	TMSB15B	A0A087X1C1	80 aa		10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	FAM231B	A6NCW3	169 aa		10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	DEFB130B	P0DP73	79 aa		10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	DEFB130A	P0DP74	79 aa		10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	RPL23	P62829	140 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	ZFP82	Q8N141	532 aa		10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	SFRP2	Q96HF1	295 aa		10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	C9orf85	Q96MD7	179 aa		10.82	□□□□□ -0.68
HDLBP-238	ENST00000479894	MT-ND4L	P03901	98 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	ATP5G1	P05496	136 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	OR5AL1	P0C617	328 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	ARMS2	P0C7Q2	107 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	ZNF876P	Q49A33	203 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	LINC00612	Q8N6U2	182 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	OR10G8	Q8NGN5	311 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	ISOC2	Q96AB3	205 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	GFRA4	Q9GZZ7	299 aa		10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	RNASE7	Q9H1E1	156 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-238	ENST00000479894	GAGE12B	A1L429	117 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	GRIFIN	A4D1Z8	144 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894		H3BVH4	76 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894		J3QL48	77 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	GAGE7	O76087	117 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	GAGE12F	P0CL80	117 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	GAGE12G	P0CL81	117 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	GAGE12I	P0CL82	117 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	CCL18	P55774	89 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	CACNG7	P62955	275 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	SLA	Q13239	276 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	TTC32	Q5I0X7	151 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	WDR73	Q6P4I2	378 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	FER1L6-AS1	Q8NA97	138 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894	BORCS7	Q96B45	105 aa		10.8	□□□□□ -0.68
HDLBP-238	ENST00000479894		A8MWV9	139 aa		10.79	□□□□□ -0.68
HDLBP-238	ENST00000479894	RNASE3	P12724	160 aa	Known RBP	10.79	□□□□□ -0.68
HDLBP-238	ENST00000479894	SPANXN1	Q5VSR9	72 aa		10.79	□□□□□ -0.68
HDLBP-238	ENST00000479894		Q6ZTI0	123 aa		10.79	□□□□□ -0.68
HDLBP-238	ENST00000479894	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.79	□□□□□ -0.68
HDLBP-238	ENST00000479894	PGPEP1	Q9NXJ5	209 aa		10.79	□□□□□ -0.68
HDLBP-238	ENST00000479894	TSKU	Q8WUA8	353 aa		10.78	□□□□□ -0.68
HDLBP-238	ENST00000479894	ANAPC16	Q96DE5	110 aa		10.78	□□□□□ -0.68
HDLBP-238	ENST00000479894	MRPL16	Q9NX20	251 aa	Known RBP	10.78	□□□□□ -0.68
HDLBP-238	ENST00000479894	LINC00588	Q9Y4M8	146 aa		10.78	□□□□□ -0.68
HDLBP-238	ENST00000479894	SNAI2	O43623	268 aa		10.77	□□□□□ -0.69
HDLBP-238	ENST00000479894	RPL19	P84098	196 aa	Known RBP	10.77	□□□□□ -0.69
HDLBP-238	ENST00000479894	OR4C5	Q8NGB2	326 aa		10.77	□□□□□ -0.69
HDLBP-238	ENST00000479894	TPPP3	Q9BW30	176 aa		10.77	□□□□□ -0.69
HDLBP-238	ENST00000479894	TRAV4	A0A0B4J268	109 aa		10.76	□□□□□ -0.69
HDLBP-238	ENST00000479894	RHOD	O00212	210 aa		10.76	□□□□□ -0.69
HDLBP-238	ENST00000479894	IGLC6	P0CF74	106 aa		10.76	□□□□□ -0.69
HDLBP-238	ENST00000479894	FOXA3	P55318	350 aa	Predicted RBP	10.76	□□□□□ -0.69
HDLBP-238	ENST00000479894	CDPF1	Q6NVV7	123 aa		10.76	□□□□□ -0.69
HDLBP-238	ENST00000479894		Q9H8V8	135 aa		10.76	□□□□□ -0.69
HDLBP-238	ENST00000479894		M0R381	172 aa		10.75	□□□□□ -0.69
HDLBP-238	ENST00000479894	C10orf91	Q5T1B1	145 aa		10.75	□□□□□ -0.69
HDLBP-238	ENST00000479894	ZFP2	Q6ZN57	461 aa		10.75	□□□□□ -0.69
HDLBP-238	ENST00000479894	SMIM15	Q7Z3B0	74 aa		10.75	□□□□□ -0.69
HDLBP-238	ENST00000479894	CTDSP1	Q9GZU7	261 aa		10.75	□□□□□ -0.69
HDLBP-238	ENST00000479894	NAT8B	Q9UHF3	227 aa		10.75	□□□□□ -0.69
HDLBP-238	ENST00000479894	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.75	□□□□□ -0.69
HDLBP-238	ENST00000479894		F5H768	121 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	NXPH4	O95158	308 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	NUDT3	O95989	172 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	TRGC1	P0CF51	173 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	SMIM17	P0DL12	118 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	CTRL	P40313	264 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	SERTAD4-AS1	Q5TG53	156 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	KRTAP1-5	Q9BYS1	174 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894		V9GYV3	84 aa		10.74	□□□□□ -0.69
HDLBP-238	ENST00000479894	TRGV4	A0A0C4DH28	118 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	FAM229A	H3BQW9	127 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	RS1	O15537	224 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	S100A8	P05109	93 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	GZMB	P10144	247 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	LYZL1	Q6UWQ5	148 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	SVBP	Q8N300	66 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	AP1S3	Q96PC3	154 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894	CNFN	Q9BYD5	112 aa		10.73	□□□□□ -0.69
HDLBP-238	ENST00000479894		A0A1B0GW15	77 aa		10.72	□□□□□ -0.69
HDLBP-238	ENST00000479894		H3BNG1	76 aa		10.72	□□□□□ -0.69
HDLBP-238	ENST00000479894	RHEB	Q15382	184 aa		10.72	□□□□□ -0.69
HDLBP-238	ENST00000479894	DMRTA1	Q5VZB9	504 aa		10.72	□□□□□ -0.69
HDLBP-238	ENST00000479894	OR10AG1	Q8NH19	301 aa		10.72	□□□□□ -0.69
HDLBP-238	ENST00000479894	PRO0255	Q9UI72	69 aa		10.72	□□□□□ -0.69
HDLBP-238	ENST00000479894		A0A1B0GUT8	65 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	HIGD1C	A8MV81	97 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	SNAPIN	O95295	136 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	ADCYAP1	P18509	176 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	RIG	Q13278	110 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	TWIST1	Q15672	202 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	CFAP126	Q5VTH2	177 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894		Q6ZSN1	163 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	IMMP2L	Q96T52	175 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	TMEM242	Q9NWH2	141 aa		10.71	□□□□□ -0.69
HDLBP-238	ENST00000479894	SMIM27	A0A1W2PRY6	76 aa		10.7	□□□□□ -0.7
HDLBP-238	ENST00000479894	KCNIP4	Q6PIL6	250 aa		10.7	□□□□□ -0.7
HDLBP-238	ENST00000479894	GTSF1	Q8WW33	167 aa		10.7	□□□□□ -0.7
HDLBP-238	ENST00000479894	PGLYRP4	Q96LB8	373 aa		10.7	□□□□□ -0.7
HDLBP-238	ENST00000479894	UPK3B	Q9BT76	320 aa		10.7	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms