RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 C7orf66A4D0T2 115 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 F6UZH7 168 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 UBE2D3P61077 147 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 UBE2D2P62837 147 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 UBE2V1Q13404 147 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 MIR17HGQ75NE6 70 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 LINC00269Q8N2A0 174 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 AP3S1Q92572 193 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 TMEM18Q96B42 140 aa4.44□□□□□ -1.7
SPTLC1-205ENST00000477888 IGLV10-54A0A075B6I4 117 aa4.43□□□□□ -1.7
SPTLC1-205ENST00000477888 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
SPTLC1-205ENST00000477888 IFNA7P01567 189 aa4.43□□□□□ -1.7
SPTLC1-205ENST00000477888 ZNF80P51504 273 aaPredicted RBP4.43□□□□□ -1.7
SPTLC1-205ENST00000477888 TREM1Q9NP99 234 aa4.43□□□□□ -1.7
SPTLC1-205ENST00000477888 UQCC1Q9NVA1 299 aa4.43□□□□□ -1.7
SPTLC1-205ENST00000477888 RABL2AQ9UBK7 228 aaPredicted RBP4.43□□□□□ -1.7
SPTLC1-205ENST00000477888 TRBV7-3A0A075B6L6 115 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 A0A096LNI7 61 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 TRBV10-1A0A0K0K1A3 114 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 CST7O76096 145 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 RPS10P46783 165 aaKnown RBP4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 RBX1P62877 108 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 LGALSLQ3ZCW2 172 aaPredicted RBP4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 LBHQ53QV2 105 aaPredicted RBP4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 PRR27Q6MZM9 219 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 CLPSL2Q6UWE3 100 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 DIRAS2Q96HU8 199 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 BCL7BQ9BQE9 202 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 FUNDC2Q9BWH2 189 aa4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 SLIRPQ9GZT3 109 aaKnown RBP4.42□□□□□ -1.7
SPTLC1-205ENST00000477888 PKIAP61925 76 aa4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 INO80EQ8NBZ0 244 aaPredicted RBP4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 OR10G8Q8NGN5 311 aa4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 HYLS1Q96M11 299 aa4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 CHCHD5Q9BSY4 110 aa4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 NMES1Q9C002 83 aa4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 GFRA4Q9GZZ7 299 aa4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 MUC17Q685J3 4493 aa4.41□□□□□ -1.7
SPTLC1-205ENST00000477888 IGLV1-50A0A075B6I6 118 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 TRAV8-4A0A0B4J246 113 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 UBE2L5PA0A1B0GUS4 154 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 C9orf170A2RU37 121 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 RGS5O15539 181 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 PTTG1O95997 202 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 P01737 135 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 GZMBP10144 247 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 REG3AQ06141 175 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 BAXQ07812 192 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 IL18Q14116 193 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 IAH1Q2TAA2 248 aaPredicted RBP4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 NTM-AS1Q6ZSK4 140 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 GOLT1AQ6ZVE7 132 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 C15orf56Q8N910 161 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 SLC25A21Q9BQT8 299 aaPredicted RBP4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 NPCDR1Q9BY65 106 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 LINC00474Q9P2X8 69 aa4.4□□□□□ -1.71
SPTLC1-205ENST00000477888 IGKV3D-20A0A0C4DH25 116 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 FGF7P21781 194 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 S100A11P31949 105 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 S100A10P60903 97 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 GAGE2BQ13066 116 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 CTF1Q16619 201 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 GAGE2EQ4V326 116 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 SPANXN2Q5MJ10 180 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 FAM74A4Q5TZK3 123 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 GAGE2AQ6NT46 116 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 MCFD2Q8NI22 146 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 MLST8Q9BVC4 326 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 C11orf1Q9H5F2 150 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 OTORQ9NRC9 128 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 OR5AC2Q9NZP5 309 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 GSKIPQ9P0R6 139 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 GAGE2DQ9UEU5 116 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 PAM16Q9Y3D7 125 aa4.39□□□□□ -1.71
SPTLC1-205ENST00000477888 OR7C2O60412 319 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 ATP6V1G1O75348 118 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 GCGP01275 180 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 KRTAP1-4P0C5Y4 121 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 FAUP35544 74 aaKnown RBP4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 RAB5CP51148 216 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 BCAP31P51572 246 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 LINC01547P58512 204 aaPredicted RBP4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 FER1L6-AS1Q8NA97 138 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 CMTM2Q8TAZ6 248 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 SFRP2Q96HF1 295 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 NAA50Q9GZZ1 169 aaKnown RBP4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 Q9H521 79 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 LYRM2Q9NU23 88 aaPredicted RBP4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 IL36BQ9NZH7 164 aa4.38□□□□□ -1.71
SPTLC1-205ENST00000477888 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 L7N2F9 121 aa4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 S100A4P26447 101 aaKnown RBP4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 SULT1A1P50225 295 aa4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 UBE2L3P68036 154 aaKnown RBP4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 GAGE6Q13070 117 aa4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
SPTLC1-205ENST00000477888 NEXN-AS1Q8NBZ9 246 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 470.9 ms