RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 Q6ZR54 194 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 FAM231DQ6ZW35 169 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 RNASE7Q9H1E1 156 aaKnown RBP10.54□□□□□ -0.72
SDC3-203ENST00000471567 RPP21Q9H633 154 aaKnown RBP10.54□□□□□ -0.72
SDC3-203ENST00000471567 Q9H8V8 135 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 IGLV2-18A0A075B6J9 118 aa10.53□□□□□ -0.72
SDC3-203ENST00000471567 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
SDC3-203ENST00000471567 GZMBP10144 247 aa10.53□□□□□ -0.72
SDC3-203ENST00000471567 CACNG7P62955 275 aa10.53□□□□□ -0.72
SDC3-203ENST00000471567 Q6ZSN1 163 aa10.53□□□□□ -0.72
SDC3-203ENST00000471567 A0A087WWL8 130 aa10.52□□□□□ -0.73
SDC3-203ENST00000471567 M0R2N4 97 aa10.52□□□□□ -0.73
SDC3-203ENST00000471567 TIRAPP58753 221 aa10.52□□□□□ -0.73
SDC3-203ENST00000471567 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
SDC3-203ENST00000471567 WDR73Q6P4I2 378 aa10.52□□□□□ -0.73
SDC3-203ENST00000471567 LINC01551Q86U37 167 aa10.52□□□□□ -0.73
SDC3-203ENST00000471567 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
SDC3-203ENST00000471567 NBDYA0A0U1RRE5 68 aa10.51□□□□□ -0.73
SDC3-203ENST00000471567 MUC21A0A140T8X8 626 aa10.51□□□□□ -0.73
SDC3-203ENST00000471567 C9JQL5 133 aa10.51□□□□□ -0.73
SDC3-203ENST00000471567 GATCO43716 136 aaKnown RBP10.51□□□□□ -0.73
SDC3-203ENST00000471567 SRSF3P84103 164 aaKnown RBP10.51□□□□□ -0.73
SDC3-203ENST00000471567 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
SDC3-203ENST00000471567 CLLU1Q5K131 121 aa10.51□□□□□ -0.73
SDC3-203ENST00000471567 TPPP3Q9BW30 176 aa10.51□□□□□ -0.73
SDC3-203ENST00000471567 ERVFC1-1P60608 527 aa10.5□□□□□ -0.73
SDC3-203ENST00000471567 RAB4BP61018 213 aa10.5□□□□□ -0.73
SDC3-203ENST00000471567 CT83Q5H943 113 aa10.5□□□□□ -0.73
SDC3-203ENST00000471567 LYZL1Q6UWQ5 148 aa10.5□□□□□ -0.73
SDC3-203ENST00000471567 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
SDC3-203ENST00000471567 AP1S3Q96PC3 154 aa10.5□□□□□ -0.73
SDC3-203ENST00000471567 TRBV10-1A0A0K0K1A3 114 aa10.49□□□□□ -0.73
SDC3-203ENST00000471567 A8MWL6 223 aa10.49□□□□□ -0.73
SDC3-203ENST00000471567 CTRLP40313 264 aa10.49□□□□□ -0.73
SDC3-203ENST00000471567 TTC32Q5I0X7 151 aa10.49□□□□□ -0.73
SDC3-203ENST00000471567 ATP6V0E2Q8NHE4 81 aa10.49□□□□□ -0.73
SDC3-203ENST00000471567 OSTCQ9NRP0 149 aa10.49□□□□□ -0.73
SDC3-203ENST00000471567 SIVA1O15304 175 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 SMIM17P0DL12 118 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 SSTP61278 116 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 SOHLH1Q5JUK2 328 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
SDC3-203ENST00000471567 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 TRGC1P0CF51 173 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 NTF3P20783 257 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 GAGE1Q13065 139 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 GAGE4Q13068 117 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 GAGE5Q13069 117 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 ZNF56Q15929 161 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 NDUFA5Q16718 116 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 MSRB1Q9NZV6 116 aa10.47□□□□□ -0.73
SDC3-203ENST00000471567 FOXA3P55318 350 aaPredicted RBP10.46□□□□□ -0.73
SDC3-203ENST00000471567 LINC00315P59091 139 aa10.46□□□□□ -0.73
SDC3-203ENST00000471567 RPL23P62829 140 aaKnown RBP10.46□□□□□ -0.73
SDC3-203ENST00000471567 C1orf134Q5TEV5 83 aa10.46□□□□□ -0.73
SDC3-203ENST00000471567 LINC00336Q6ZUF6 198 aa10.46□□□□□ -0.73
SDC3-203ENST00000471567 C15orf54Q8N8G6 183 aa10.46□□□□□ -0.73
SDC3-203ENST00000471567 GTSF1Q8WW33 167 aa10.46□□□□□ -0.73
SDC3-203ENST00000471567 ISOC2Q96AB3 205 aa10.46□□□□□ -0.73
SDC3-203ENST00000471567 Q9UF83 564 aa10.46□□□□□ -0.73
SDC3-203ENST00000471567 FAM231BA6NCW3 169 aa10.45□□□□□ -0.74
SDC3-203ENST00000471567 F5H697 171 aa10.45□□□□□ -0.74
SDC3-203ENST00000471567 BTF3P20290 206 aaKnown RBP10.45□□□□□ -0.74
SDC3-203ENST00000471567 RPL36AP83881 106 aaKnown RBP10.45□□□□□ -0.74
SDC3-203ENST00000471567 LELP1Q5T871 98 aa10.45□□□□□ -0.74
SDC3-203ENST00000471567 OR10G8Q8NGN5 311 aa10.45□□□□□ -0.74
SDC3-203ENST00000471567 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
SDC3-203ENST00000471567 RPL36ALQ969Q0 106 aaKnown RBP10.45□□□□□ -0.74
SDC3-203ENST00000471567 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
SDC3-203ENST00000471567 TRAV8-6A0A0B4J262 113 aa10.44□□□□□ -0.74
SDC3-203ENST00000471567 K7EP13 123 aa10.44□□□□□ -0.74
SDC3-203ENST00000471567 TWIST1Q15672 202 aa10.44□□□□□ -0.74
SDC3-203ENST00000471567 ADIRFQ15847 76 aa10.44□□□□□ -0.74
SDC3-203ENST00000471567 TRBV7-3A0A075B6L6 115 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 TRAV9-2A0A087WT02 112 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 A0A087WWC5 75 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 RTL8CO15255 209 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 DNAH10OSP0CZ25 163 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 EVI2AP22794 236 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 WFDC10BQ8IUB3 73 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 V9GYV3 84 aa10.43□□□□□ -0.74
SDC3-203ENST00000471567 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 H7C1H1 209 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 UBE2D3P61077 147 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 UBE2D2P62837 147 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 OR10J3Q5JRS4 329 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 BORCS7Q96B45 105 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 PGLYRP4Q96LB8 373 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
SDC3-203ENST00000471567 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
SDC3-203ENST00000471567 HIGD1CA8MV81 97 aa10.41□□□□□ -0.74
SDC3-203ENST00000471567 MGPP08493 103 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms