RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-208	ENST00000470171	LINC00315	P59091	139 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	RAB4B	P61018	213 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	TNP2	Q05952	138 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	OR10J3	Q5JRS4	329 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	SPANXN1	Q5VSR9	72 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	PRR27	Q6MZM9	219 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	LYPD6B	Q8NI32	183 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	MSRB1	Q9NZV6	116 aa		10.52	□□□□□ -0.73
FDPS-208	ENST00000470171	DNAH17	Q9UFH2	4485 aa		10.51	□□□□□ -0.73
FDPS-208	ENST00000470171	LOC100131303	A0A0U1RQF7	123 aa		10.51	□□□□□ -0.73
FDPS-208	ENST00000470171	CRYGD	P07320	174 aa		10.51	□□□□□ -0.73
FDPS-208	ENST00000470171	NACA	E9PAV3	2078 aa		10.51	□□□□□ -0.73
FDPS-208	ENST00000470171		P01737	135 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	SMIM17	P0DL12	118 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	LINC00694	P0DN24	101 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	CACNG7	P62955	275 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	RPL36A	P83881	106 aa	Known RBP	10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	LAGE3	Q14657	143 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	TOR2A	Q5JU69	321 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	FAM74A4	Q5TZK3	123 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	WDR73	Q6P4I2	378 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	WFDC10B	Q8IUB3	73 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	RPL36AL	Q969Q0	106 aa	Known RBP	10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	PGPEP1	Q9NXJ5	209 aa		10.5	□□□□□ -0.73
FDPS-208	ENST00000470171	C19orf71	A6NCJ1	209 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	ERVFC1-1	P60608	527 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	TMEM97	Q5BJF2	176 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	OR10G8	Q8NGN5	311 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	AP1S3	Q96PC3	154 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	CHCHD7	Q9BUK0	85 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	DERL1	Q9BUN8	251 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	SAMD10	Q9BYL1	202 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	FAT2	Q9NYQ8	4349 aa		10.49	□□□□□ -0.73
FDPS-208	ENST00000470171	TRBV7-3	A0A075B6L6	115 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	GAGE12J	A6NER3	117 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	RBFOX3	A6NFN3	312 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	IBA57-AS1	B1ANH7	110 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	IGLV2-8	P01709	118 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	PKIA	P61925	76 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	GAGE1	Q13065	139 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	GAGE4	Q13068	117 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	GAGE5	Q13069	117 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	GAGE13	Q4V321	117 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	CDPF1	Q6NVV7	123 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	ALKAL2	Q6UX46	152 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171		Q6ZRN7	208 aa	Predicted RBP	10.48	□□□□□ -0.73
FDPS-208	ENST00000470171		Q6ZSN1	163 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	OR2D3	Q8NGH3	330 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171	JPT2	Q9H910	190 aa		10.48	□□□□□ -0.73
FDPS-208	ENST00000470171		A0A087WWL8	130 aa		10.47	□□□□□ -0.73
FDPS-208	ENST00000470171		H7C1H1	209 aa		10.47	□□□□□ -0.73
FDPS-208	ENST00000470171	ELOB	Q15370	118 aa		10.47	□□□□□ -0.73
FDPS-208	ENST00000470171	FER1L6-AS1	Q8NA97	138 aa		10.47	□□□□□ -0.73
FDPS-208	ENST00000470171	OR10AG1	Q8NH19	301 aa		10.47	□□□□□ -0.73
FDPS-208	ENST00000470171	TM2D2	Q9BX73	214 aa		10.47	□□□□□ -0.73
FDPS-208	ENST00000470171	COX11	Q9Y6N1	276 aa		10.47	□□□□□ -0.73
FDPS-208	ENST00000470171	RAB19	A4D1S5	217 aa		10.46	□□□□□ -0.73
FDPS-208	ENST00000470171	C16orf90	A8MZG2	172 aa		10.46	□□□□□ -0.73
FDPS-208	ENST00000470171	IGLC6	P0CF74	106 aa		10.46	□□□□□ -0.73
FDPS-208	ENST00000470171	RPL19	P84098	196 aa	Known RBP	10.46	□□□□□ -0.73
FDPS-208	ENST00000470171	KCNIP4	Q6PIL6	250 aa		10.46	□□□□□ -0.73
FDPS-208	ENST00000470171	C14orf178	Q8N769	122 aa	Predicted RBP	10.46	□□□□□ -0.73
FDPS-208	ENST00000470171	URGCP-MRPS24	S4R325	110 aa		10.46	□□□□□ -0.73
FDPS-208	ENST00000470171	TRAV8-3	A0A0A6YYJ7	113 aa		10.45	□□□□□ -0.74
FDPS-208	ENST00000470171	TRGC1	P0CF51	173 aa		10.45	□□□□□ -0.74
FDPS-208	ENST00000470171	TRBV20OR9-2	A0A075B6H5	130 aa		10.44	□□□□□ -0.74
FDPS-208	ENST00000470171	UBE2D3	P61077	147 aa		10.44	□□□□□ -0.74
FDPS-208	ENST00000470171	UBE2D2	P62837	147 aa		10.44	□□□□□ -0.74
FDPS-208	ENST00000470171	ZNF56	Q15929	161 aa		10.44	□□□□□ -0.74
FDPS-208	ENST00000470171	DAZ4	Q86SG3	579 aa	Known RBP	10.44	□□□□□ -0.74
FDPS-208	ENST00000470171	DNAJC30	Q96LL9	226 aa		10.44	□□□□□ -0.74
FDPS-208	ENST00000470171	DAZ3	Q9NR90	486 aa	Known RBP	10.44	□□□□□ -0.74
FDPS-208	ENST00000470171		F5H697	171 aa		10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	CDK2AP2	O75956	126 aa		10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	FAM231D	Q6ZW35	169 aa		10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	SPATA12	Q7Z6I5	190 aa		10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	FRZB	Q92765	325 aa		10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	RMI2	Q96E14	147 aa		10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	CNFN	Q9BYD5	112 aa		10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	EIF5A2	Q9GZV4	153 aa	Known RBP	10.43	□□□□□ -0.74
FDPS-208	ENST00000470171	PSCA	O43653	123 aa		10.42	□□□□□ -0.74
FDPS-208	ENST00000470171	NUDT10	Q8NFP7	164 aa		10.42	□□□□□ -0.74
FDPS-208	ENST00000470171	NUDT11	Q96G61	164 aa		10.42	□□□□□ -0.74
FDPS-208	ENST00000470171	SMDT1	Q9H4I9	107 aa		10.42	□□□□□ -0.74
FDPS-208	ENST00000470171	RPP21	Q9H633	154 aa	Known RBP	10.42	□□□□□ -0.74
FDPS-208	ENST00000470171	CTRL	P40313	264 aa		10.41	□□□□□ -0.74
FDPS-208	ENST00000470171	CT83	Q5H943	113 aa		10.41	□□□□□ -0.74
FDPS-208	ENST00000470171	SMIM15	Q7Z3B0	74 aa		10.41	□□□□□ -0.74
FDPS-208	ENST00000470171	OCC1	Q8TAD7	63 aa		10.41	□□□□□ -0.74
FDPS-208	ENST00000470171	FAM210A	Q96ND0	272 aa		10.41	□□□□□ -0.74
FDPS-208	ENST00000470171	TPPP3	Q9BW30	176 aa		10.41	□□□□□ -0.74
FDPS-208	ENST00000470171	KIF25-AS1	Q9Y6Z4	181 aa		10.41	□□□□□ -0.74
FDPS-208	ENST00000470171	PKD1	P98161	4303 aa		10.4	□□□□□ -0.74
FDPS-208	ENST00000470171		A0A087WTM6	91 aa		10.4	□□□□□ -0.74
FDPS-208	ENST00000470171		A0A087WX48	190 aa		10.4	□□□□□ -0.74
FDPS-208	ENST00000470171		A8MWL6	223 aa		10.4	□□□□□ -0.74
FDPS-208	ENST00000470171	FAM74A3	Q4VXF1	159 aa		10.4	□□□□□ -0.74
FDPS-208	ENST00000470171	NTN5	Q8WTR8	489 aa	Predicted RBP	10.4	□□□□□ -0.74
FDPS-208	ENST00000470171	TRBV6-8	A0A0A6YYG3	113 aa		10.39	□□□□□ -0.75
FDPS-208	ENST00000470171	FAM231B	A6NCW3	169 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms