RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C1QBP02746 253 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 UBE2G1P62253 170 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 TOR2AQ5JU69 321 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 FAM162BQ5T6X4 162 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 COX8CQ7Z4L0 72 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 SFRP2Q96HF1 295 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 CYTL1Q9NRR1 136 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 PHLDA3Q9Y5J5 127 aa8.77□□□□□ -1.01
CPSF4-210ENST00000469897 MAP1LC3B2A6NCE7 125 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 TPT1P13693 172 aaKnown RBP8.76□□□□□ -1.01
CPSF4-210ENST00000469897 LINC01620Q4KN68 170 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 CST9LP1Q5W188 147 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 NIT1Q86X76 327 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 FMC1Q96HJ9 113 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 MAP1LC3BQ9GZQ8 125 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 KLK12Q9UKR0 248 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 URGCP-MRPS24S4R325 110 aa8.76□□□□□ -1.01
CPSF4-210ENST00000469897 G3V3Q6 166 aa8.75□□□□□ -1.01
CPSF4-210ENST00000469897 RHODO00212 210 aa8.75□□□□□ -1.01
CPSF4-210ENST00000469897 ARPC5O15511 151 aa8.75□□□□□ -1.01
CPSF4-210ENST00000469897 FHITP49789 147 aa8.75□□□□□ -1.01
CPSF4-210ENST00000469897 ZNF674Q2M3X9 581 aa8.75□□□□□ -1.01
CPSF4-210ENST00000469897 COX11Q9Y6N1 276 aa8.75□□□□□ -1.01
CPSF4-210ENST00000469897 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
CPSF4-210ENST00000469897 DNAH8Q96JB1 4490 aa8.74□□□□□ -1.01
CPSF4-210ENST00000469897 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
CPSF4-210ENST00000469897 TRBV6-1A0A0K0K1D8 114 aa8.74□□□□□ -1.01
CPSF4-210ENST00000469897 RBFOX3A6NFN3 312 aa8.74□□□□□ -1.01
CPSF4-210ENST00000469897 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
CPSF4-210ENST00000469897 STOML3Q8TAV4 291 aa8.74□□□□□ -1.01
CPSF4-210ENST00000469897 A0A087WX48 190 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 PAGE4O60829 102 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 LTAP01374 205 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 Q6ZSA8 131 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 ZFP82Q8N141 532 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 Q8N976 141 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 UBE2WQ96B02 151 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 RMI2Q96E14 147 aa8.73□□□□□ -1.01
CPSF4-210ENST00000469897 TMEM262E9PQX1 116 aa8.72□□□□□ -1.01
CPSF4-210ENST00000469897 SMLR1H3BR10 107 aa8.72□□□□□ -1.01
CPSF4-210ENST00000469897 RPL36AP83881 106 aaKnown RBP8.72□□□□□ -1.01
CPSF4-210ENST00000469897 RPL36ALQ969Q0 106 aaKnown RBP8.72□□□□□ -1.01
CPSF4-210ENST00000469897 TRBV7-3A0A075B6L6 115 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 TRBV10-1A0A0K0K1A3 114 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 A0A1B0GV50 99 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 J3QL48 77 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
CPSF4-210ENST00000469897 SEC11BP0C7V7 166 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 AKR1C3P42330 323 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 UBE2D3P61077 147 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 SSTP61278 116 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 UBE2D2P62837 147 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 RPL19P84098 196 aaKnown RBP8.71□□□□□ -1.02
CPSF4-210ENST00000469897 ELOBQ15370 118 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 KCNIP4Q6PIL6 250 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 SFT2D1Q8WV19 159 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 TCEAL7Q9BRU2 100 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 MYCBP2O75592 4640 aa8.71□□□□□ -1.02
CPSF4-210ENST00000469897 MUC21A0A0G2JKD1 596 aa8.7□□□□□ -1.02
CPSF4-210ENST00000469897 MUC21A0A140T8X8 626 aa8.7□□□□□ -1.02
CPSF4-210ENST00000469897 MBD3L1Q8WWY6 194 aa8.7□□□□□ -1.02
CPSF4-210ENST00000469897 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
CPSF4-210ENST00000469897 RAB4BP61018 213 aa8.69□□□□□ -1.02
CPSF4-210ENST00000469897 ENHOQ6UWT2 76 aa8.69□□□□□ -1.02
CPSF4-210ENST00000469897 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
CPSF4-210ENST00000469897 BAGE2Q86Y30 109 aa8.69□□□□□ -1.02
CPSF4-210ENST00000469897 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
CPSF4-210ENST00000469897 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
CPSF4-210ENST00000469897 S100A9P06702 114 aaKnown RBP8.68□□□□□ -1.02
CPSF4-210ENST00000469897 ZNF56Q15929 161 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 RGS21Q2M5E4 152 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 TMUB2Q71RG4 321 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 KCNRGQ8N5I3 272 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 OR10G8Q8NGN5 311 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
CPSF4-210ENST00000469897 SCO2A0A1W2PP80 73 aa8.67□□□□□ -1.02
CPSF4-210ENST00000469897 F5H697 171 aa8.67□□□□□ -1.02
CPSF4-210ENST00000469897 Q0VG73 95 aa8.67□□□□□ -1.02
CPSF4-210ENST00000469897 SPANXN1Q5VSR9 72 aa8.67□□□□□ -1.02
CPSF4-210ENST00000469897 PRR27Q6MZM9 219 aa8.67□□□□□ -1.02
CPSF4-210ENST00000469897 ATRAIDQ6UW56 229 aa8.67□□□□□ -1.02
CPSF4-210ENST00000469897 CHAC1Q9BUX1 264 aa8.67□□□□□ -1.02
CPSF4-210ENST00000469897 ZNF471Q9BX82 626 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-210ENST00000469897 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-210ENST00000469897 ANGP03950 147 aaKnown RBP8.66□□□□□ -1.02
CPSF4-210ENST00000469897 C15orf54Q8N8G6 183 aa8.66□□□□□ -1.02
CPSF4-210ENST00000469897 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
CPSF4-210ENST00000469897 DEFB104AQ8WTQ1 72 aa8.66□□□□□ -1.02
CPSF4-210ENST00000469897 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-210ENST00000469897 C1orf43Q9BWL3 253 aa8.66□□□□□ -1.02
CPSF4-210ENST00000469897 KRTAP29-1A8MX34 341 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-210ENST00000469897 UMAD1C9J7I0 102 aa8.65□□□□□ -1.02
CPSF4-210ENST00000469897 SNAI2O43623 268 aa8.65□□□□□ -1.02
CPSF4-210ENST00000469897 PFDN1O60925 122 aa8.65□□□□□ -1.02
CPSF4-210ENST00000469897 H2AFB1P0C5Y9 115 aa8.65□□□□□ -1.02
CPSF4-210ENST00000469897 MPV17L2Q567V2 206 aa8.65□□□□□ -1.02
CPSF4-210ENST00000469897 CHCHD5Q9BSY4 110 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms