RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 COL11A1P12107 1806 aaPredicted RBP2.09□□□□□ -2.08
PTCD3-205ENST00000464541 RP1P56715 2156 aa2.09□□□□□ -2.08
PTCD3-205ENST00000464541 GAPVD1Q14C86 1478 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 LAMB4A4D0S4 1761 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 STRCQ7RTU9 1775 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 MT-ATP8P03928 68 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 IGLC1P0CG04 106 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 Q0VG73 95 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 TMEM14CQ9P0S9 112 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 LINC00312Q9Y6C7 94 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 KIAA1549Q9HCM3 1950 aa2.08□□□□□ -2.08
PTCD3-205ENST00000464541 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-205ENST00000464541 RBBP6Q7Z6E9 1792 aaKnown RBP2.08□□□□□ -2.08
PTCD3-205ENST00000464541 TRAV12-3A0A0B4J271 114 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 HCG22E2RYF7 251 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 PPYP01298 95 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 IGHV3-30P01768 117 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 CCKP06307 115 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 IGHV3-30-5P0DP03 117 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 GNG11P61952 73 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 DEFB103AP81534 67 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 MPV17LQ2QL34 196 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 CSAG1Q6PB30 78 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 ZNF818PQ6ZRF7 136 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 COA5Q86WW8 74 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 IFI27L1Q96BM0 104 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 MGST2Q99735 147 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 PMCHL2Q9BQD1 86 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 BCORL1Q5H9F3 1711 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 LAMB2P55268 1798 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 SCAPERQ9BY12 1400 aa2.07□□□□□ -2.08
PTCD3-205ENST00000464541 MAGI1Q96QZ7 1491 aaPredicted RBP2.07□□□□□ -2.08
PTCD3-205ENST00000464541 KDM6BO15054 1643 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 TRAV23DV6A0A075B6W5 121 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 NUPR2A6NF83 97 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 JMJD7-PLA2G4BH0Y9G9 81 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 ATOX1O00244 68 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 SIX6O95475 246 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 PCOTHQ58A44 107 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 PYY3Q5JQD4 70 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 REG4Q9BYZ8 158 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 PRO1933Q9H354 126 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 SNURFQ9Y675 71 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 MED14O60244 1454 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 VWDEQ8N2E2 1590 aa2.06□□□□□ -2.08
PTCD3-205ENST00000464541 SPHKAPQ2M3C7 1700 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 TRBV6-5A0A0K0K1A5 114 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 HIGD1CA8MV81 97 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 NDUFC1O43677 76 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 SPRNQ5BIV9 151 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 C6orf52Q5T4I8 152 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 CYP2G1PQ6ZSU1 146 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 PPP1R1CQ8WVI7 109 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 KIAA1549LQ6ZVL6 1849 aa2.05□□□□□ -2.08
PTCD3-205ENST00000464541 MCM3APO60318 1980 aa2.04□□□□□ -2.08
PTCD3-205ENST00000464541 LRP5O75197 1615 aa2.04□□□□□ -2.08
PTCD3-205ENST00000464541 MICAL3Q7RTP6 2002 aa2.04□□□□□ -2.08
PTCD3-205ENST00000464541 NINQ8N4C6 2090 aa2.04□□□□□ -2.08
PTCD3-205ENST00000464541 WFDC10AQ9H1F0 79 aa2.04□□□□□ -2.08
PTCD3-205ENST00000464541 ICE1Q9Y2F5 2266 aa2.04□□□□□ -2.08
PTCD3-205ENST00000464541 ARHGAP35Q9NRY4 1499 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 ABCC5O15440 1437 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 TRBV7-1A0A0A6YYK4 115 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 TEX49A0A1B0GTD5 131 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 CRYM-AS1A6NIL9 109 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 DNAL4O96015 105 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 RNASE3P12724 160 aaKnown RBP2.03□□□□□ -2.08
PTCD3-205ENST00000464541 PDE6GP18545 87 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 SEC11AP67812 179 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 C10orf82Q8WW14 230 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 NPVFQ9HCQ7 196 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 MED9Q9NWA0 146 aa2.03□□□□□ -2.08
PTCD3-205ENST00000464541 CASZ1Q86V15 1759 aa2.03□□□□□ -2.09
PTCD3-205ENST00000464541 COL4A2P08572 1712 aa2.03□□□□□ -2.09
PTCD3-205ENST00000464541 KIAA1551Q9HCM1 1747 aa2.03□□□□□ -2.09
PTCD3-205ENST00000464541 ANKRD26Q9UPS8 1709 aa2.03□□□□□ -2.09
PTCD3-205ENST00000464541 CASKIN1Q8WXD9 1431 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 hADV29S1A0JD25 119 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 TFF1P04155 84 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 PEA15Q15121 130 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 SPATA45Q537H7 98 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 C10orf128Q5T292 105 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 ODF3Q96PU9 254 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 S100A13Q99584 98 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 LIMD2Q9BT23 127 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 RTTNQ86VV8 2226 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 NUMA1Q14980 2115 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 MPDZO75970 2070 aa2.02□□□□□ -2.09
PTCD3-205ENST00000464541 ADGRB3O60242 1522 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 PTPRMP28827 1452 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 UACAQ9BZF9 1416 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 ANKRD36BQ8N2N9 1353 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 IGKV3-7A0A075B6H7 116 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 TRGV2A0A075B6R0 118 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 INE1O15225 51 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 SFT2D2O95562 160 aa2.01□□□□□ -2.09
PTCD3-205ENST00000464541 FAUP35544 74 aaKnown RBP2.01□□□□□ -2.09
PTCD3-205ENST00000464541 LINC00322Q6ZN03 302 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-205ENST00000464541 TSLPQ969D9 159 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms