RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 GAGE12JA6NER3 117 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 J3QKU1 62 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 M0QXV9 152 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 GAGE7O76087 117 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 GAGE12FP0CL80 117 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 GAGE12GP0CL81 117 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 GAGE12IP0CL82 117 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 GAGE4Q13068 117 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 TTC32Q5I0X7 151 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 GCN1Q92616 2671 aaKnown RBP11.72□□□□□ -0.53
SSR4-206ENST00000460616 IGHV7-81A0A0B4J1V7 117 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 PPP1R17O96001 155 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 IGF1P05019 195 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 CD3EP07766 207 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 PMVKQ15126 192 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
SSR4-206ENST00000460616 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
SSR4-206ENST00000460616 TP53TG1Q9Y2A0 90 aa11.71□□□□□ -0.53
SSR4-206ENST00000460616 AKAP6Q13023 2319 aa11.71□□□□□ -0.53
SSR4-206ENST00000460616 CRLF1O75462 422 aa11.71□□□□□ -0.53
SSR4-206ENST00000460616 ARL3P36405 182 aa11.71□□□□□ -0.53
SSR4-206ENST00000460616 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
SSR4-206ENST00000460616 IGHV1-69DA0A0B4J2H0 117 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 IGIPA6NJ69 53 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 ODF3BA8MYP8 253 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 IFITM1P13164 125 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 CLEC19AQ6UXS0 136 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 METTL26Q96S19 204 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 Q8N6K4 173 aa11.7□□□□□ -0.54
SSR4-206ENST00000460616 A4D1N5 150 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 CCDC179H3BU77 68 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 H7C2G1 150 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 Q8N1Y9 231 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 NTN5Q8WTR8 489 aaPredicted RBP11.69□□□□□ -0.54
SSR4-206ENST00000460616 LENEPQ9Y5L5 61 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 TRAV21A0A0B4J279 112 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 J3QQQ9 107 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 IGHV3-33P01772 117 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 DEFB104AQ8WTQ1 72 aa11.69□□□□□ -0.54
SSR4-206ENST00000460616 ECSCRQ19T08 205 aa11.68□□□□□ -0.54
SSR4-206ENST00000460616 AMELXQ99217 191 aa11.68□□□□□ -0.54
SSR4-206ENST00000460616 LGALS3P17931 250 aaKnown RBP11.68□□□□□ -0.54
SSR4-206ENST00000460616 ZNRF2Q8NHG8 242 aa11.68□□□□□ -0.54
SSR4-206ENST00000460616 FAM110DQ8TAY7 271 aaPredicted RBP11.68□□□□□ -0.54
SSR4-206ENST00000460616 TMEM141Q96I45 108 aa11.68□□□□□ -0.54
SSR4-206ENST00000460616 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
SSR4-206ENST00000460616 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
SSR4-206ENST00000460616 WNK2Q9Y3S1 2297 aa11.67□□□□□ -0.54
SSR4-206ENST00000460616 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
SSR4-206ENST00000460616 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
SSR4-206ENST00000460616 VMO1Q7Z5L0 202 aa11.67□□□□□ -0.54
SSR4-206ENST00000460616 ZFAND2AQ8N6M9 145 aa11.67□□□□□ -0.54
SSR4-206ENST00000460616 LINC00477Q96M19 166 aa11.67□□□□□ -0.54
SSR4-206ENST00000460616 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
SSR4-206ENST00000460616 M0R1W7 72 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
SSR4-206ENST00000460616 P0DMU3 169 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 FAM231AP0DMU4 169 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 FAM231CP0DMU5 169 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 EBI3Q14213 229 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 Q6Q795 121 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 FASNP49327 2511 aaKnown RBP11.66□□□□□ -0.54
SSR4-206ENST00000460616 CENPEQ02224 2701 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 GNRH2O43555 120 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 ATXN8Q156A1 80 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 Q8N9W7 124 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 C20orf173Q96LM9 149 aa11.66□□□□□ -0.54
SSR4-206ENST00000460616 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 CELSR2Q9HCU4 2923 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 TEX49A0A1B0GTD5 131 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 Q1RN00 199 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 ZNF876PQ49A33 203 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 LINC01620Q4KN68 170 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 TIMM17AQ99595 171 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 U3KQE9 123 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 CSMD2Q7Z408 3487 aa11.65□□□□□ -0.54
SSR4-206ENST00000460616 FBN2P35556 2912 aa11.65□□□□□ -0.55
SSR4-206ENST00000460616 TRAV2A0A0B4J234 112 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 A0A0B4J2C4 111 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 RNASE4P34096 147 aaKnown RBP11.64□□□□□ -0.55
SSR4-206ENST00000460616 MUSTN1Q8IVN3 82 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 VCYO14598 125 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 ELANEP08246 267 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 MED14OSP0DP75 135 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 POLR2KP53803 58 aaKnown RBP11.64□□□□□ -0.55
SSR4-206ENST00000460616 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
SSR4-206ENST00000460616 HIST2H2BCQ6DN03 193 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 C9orf139Q6ZV77 190 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 POM121L12Q8N7R1 296 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 EEF1AKMT3Q96AZ1 226 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 ODF3Q96PU9 254 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
SSR4-206ENST00000460616 IGHV4OR15-8A0A075B7B6 117 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 A0A087WW49 117 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 OOSP1A8MZH6 123 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms