RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	PATE2	Q6UY27	113 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	ORMDL3	Q8N138	153 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	FAM24B	Q8N5W8	94 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	FAM3B	P58499	235 aa	Predicted RBP	6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	CYSLTR1	Q9Y271	337 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	TMEM170B	Q5T4T1	132 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	ISOC2	Q96AB3	205 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	SCGB3A1	Q96QR1	104 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	OVOL2	Q9BRP0	275 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	MUC3A	Q02505	3323 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	SFRP2	Q96HF1	295 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	SMDT1	Q9H4I9	107 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	NMB	P08949	121 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	GCSH	P23434	173 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	SCGB1D4	Q6XE38	83 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	TMEM70	Q9BUB7	260 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	IL36B	Q9NZH7	164 aa		6.22	□□□□□ -1.41
HCG18-238	ENST00000449544	RNF222	A6NCQ9	220 aa		6.21	□□□□□ -1.41
HCG18-238	ENST00000449544	PGPEP1L	A6NFU8	196 aa		6.21	□□□□□ -1.41
HCG18-238	ENST00000449544	CIRBP	Q14011	172 aa	Known RBP	6.21	□□□□□ -1.41
HCG18-238	ENST00000449544		A0A087X0K7	114 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	TRAV4	A0A0B4J268	109 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	C9orf47	Q6ZRZ4	202 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	OR13C6P	Q8NH95	151 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	MDFIC	Q9P1T7	246 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	PPBP	P02775	128 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	POM121L12	Q8N7R1	296 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	NUDT10	Q8NFP7	164 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	NUDT11	Q96G61	164 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	DKK2	Q9UBU2	259 aa		6.21	□□□□□ -1.42
HCG18-238	ENST00000449544	XCL1	P47992	114 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	LGALS9B	Q3B8N2	356 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	DCANP1	Q8TF63	244 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	ZNF503	Q96F45	646 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	SEC11A	P67812	179 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	C9orf62	Q8N4C0	152 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	LINC00469	Q8N7U9	141 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544		Q9H8V8	135 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	CR1	P17927	2039 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	WIPF1	O43516	503 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544		Q0VG73	95 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	MBD3L1	Q8WWY6	194 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	ZC2HC1A	Q96GY0	325 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	MAP1LC3C	Q9BXW4	147 aa		6.2	□□□□□ -1.42
HCG18-238	ENST00000449544	LRCOL1	A6NCL2	159 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	IGKV2-24	A0A0C4DH68	120 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	SDHAF1	A6NFY7	115 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	C16orf90	A8MZG2	172 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	LECT2	O14960	151 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	NCR2	O95944	276 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544		Q1RN00	199 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	MORN5	Q5VZ52	161 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	OCC1	Q8TAD7	63 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	GTSF1	Q8WW33	167 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	AGRN	O00468	2067 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	USP34	Q70CQ2	3546 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	TYMS	P04818	313 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	KIAA1644	Q3SXP7	199 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	IGKV1D-37	A0A075B6S9	117 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	MT-ND6	P03923	174 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	TEX43	Q6ZNM6	134 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	C18orf15	Q96N68	181 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	ODF3	Q96PU9	254 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	GTSF1L	Q9H1H1	148 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	NIT2	Q9NQR4	276 aa		6.19	□□□□□ -1.42
HCG18-238	ENST00000449544	MUC4	Q99102	2169 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	TRBV7-3	A0A075B6L6	115 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	ZNF506	Q5JVG8	444 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	ZNF479	Q96JC4	524 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	C20orf173	Q96LM9	149 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	CLUHP3	Q96NS8	147 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	OR10AG1	Q8NH19	301 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544		I3L3M4	83 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	EIF4EBP1	Q13541	118 aa	Predicted RBP	6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	ORMDL2	Q53FV1	153 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	C7orf33	Q8WU49	177 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	CAMK2N2	Q96S95	79 aa		6.18	□□□□□ -1.42
HCG18-238	ENST00000449544	UQCC3	Q6UW78	93 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	TSKU	Q8WUA8	353 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	PRM2	P04554	102 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	GAGE2B	Q13066	116 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	DAZ2	Q13117	558 aa	Known RBP	6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	DAZ4	Q86SG3	579 aa	Known RBP	6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	TMEM191A	Q9H0A3	160 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	DAZ3	Q9NR90	486 aa	Known RBP	6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	OSTC	Q9NRP0	149 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	IGLC2	P0DOY2	106 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	NKAPP1	Q8N9T2	125 aa		6.17	□□□□□ -1.42
HCG18-238	ENST00000449544	TRBV7-9	A0A0J9YWB2	115 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	RPL18A	Q02543	176 aa	Known RBP	6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	EGFEM1P	Q0D2K5	195 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	MSRB1	Q9NZV6	116 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	PRSS29P	A6NIE9	313 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544		P0C879	139 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	HNRNPA3	P51991	378 aa	Known RBP	6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	KRTDAP	P60985	99 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	IGLV5-52	A0A0A0MRZ9	124 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544		A0A0U1RRA0	63 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	MRGPRG-AS1	Q2M3A8	158 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms