RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SLC50A1Q9BRV3 221 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 EDA2RQ9HAV5 297 aa3.15□□□□□ -1.91
HMGB1P16-201ENST00000447155 UNC13CQ8NB66 2214 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV1OR15-1A0A075B7D0 117 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 TRAV3A0A0B4J244 114 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 DEFB108AA8MXU0 73 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 NDUFC2-KCTD14E9PQ53 114 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 CD7P09564 240 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 DLX1P56177 255 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 ZNF56Q15929 161 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 C9orf129Q5T035 196 aaKnown RBP3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 HES3Q5TGS1 186 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 LINC00322Q6ZN03 302 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 MDP1Q86V88 176 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 BAALCQ8WXS3 180 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 ODF3Q96PU9 254 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 SCGB3A1Q96QR1 104 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 SMIM2Q9BVW6 85 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 NDUFA4L2Q9NRX3 87 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 LINC00527Q9UJ94 153 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 PDE4DIPQ5VU43 2346 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 DSCAMO60469 2012 aa3.14□□□□□ -1.91
HMGB1P16-201ENST00000447155 TRBV19A0A075B6N1 114 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 TRBV30A0A0K0K1B3 111 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 SDHAF1A6NFY7 115 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 C11orf86A6NJI1 115 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 H3BRN7 92 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 M0R381 172 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 OVOL1O14753 267 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 LY6G6DO95868 133 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV4-34P06331 123 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 CRYGDP07320 174 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGLC6P0CF74 106 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 CNTFRP26992 372 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 NPC2P61916 151 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 FAM201AQ5SY85 155 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 TEX36Q5VZQ5 186 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 PATE2Q6UY27 113 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 WDR86Q86TI4 376 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 C11orf53Q8IXP5 236 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 C14orf178Q8N769 122 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 METTL26Q96S19 204 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 SHANK2-AS3Q9BTD1 123 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 TTTY13Q9BZ97 58 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGKV1D-37A0A075B6S9 117 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 TRAV17A0A0B4J275 112 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 A0A0J9YY99 117 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 RBAKDNA6NC62 111 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 NDUFC2O95298 119 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 FSTL3O95633 263 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 DNAL4O96015 105 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV3-30P01768 117 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV3-30-5P0DP03 117 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 RPL27AP46776 148 aaKnown RBP3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 ATP5EP56381 51 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 DEFB133Q30KQ1 61 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 ATP5EP2Q5VTU8 51 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 SFTA2Q6UW10 78 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 ZNF833PQ6ZTB9 187 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 SLC25A29Q8N8R3 303 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 DAND5Q8N907 189 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 TOMM6Q96B49 74 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 PLEKHB2Q96CS7 222 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 TMEM141Q96I45 108 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 ICOSQ9Y6W8 199 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 CABIN1Q9Y6J0 2220 aa3.12□□□□□ -1.91
HMGB1P16-201ENST00000447155 TRAV13-1A0A0B4J241 112 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 A0A0J9YX75 114 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 TEX49A0A1B0GTD5 131 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 OOSP1A8MZH6 123 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 C5orf67F2Z3F1 127 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 MRPS12O15235 138 aaKnown RBP3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV3-33P01772 117 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 COX6A1P12074 109 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 COX6B1P14854 86 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 FXYD7P58549 80 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 CCL8P80075 99 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 RPL18AQ02543 176 aaKnown RBP3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 EGFEM1PQ0D2K5 195 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 EBI3Q14213 229 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 DEFB121Q5J5C9 76 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 S100A7L2Q5SY68 101 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 SPANXN1Q5VSR9 72 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 ZFP2Q6ZN57 461 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 Q6ZQT7 251 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 EXOC3-AS1Q8N2X6 119 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 C8orf31Q8N9H6 132 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 PRORYQ9H606 182 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 V9GYY9 64 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 NAV3Q8IVL0 2385 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 PCNX2A6NKB5 2137 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 SEC16AO15027 2179 aa3.11□□□□□ -1.91
HMGB1P16-201ENST00000447155 PCNTO95613 3336 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms