RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 NOTCH2Q04721 2471 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 J3QQQ9 107 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 IGHV3-11P01762 117 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 MRGPRG-AS1Q2M3A8 158 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 NRACQ8N912 160 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 ITLN2Q8WWU7 325 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 RAI1Q7Z5J4 1906 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 TACC2O95359 2948 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 A0A087WWL8 130 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 RHODO00212 210 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 KALRNO60229 2985 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 RASL10AQ92737 203 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 CSMD1Q96PZ7 3565 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 PTPN13Q12923 2485 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 A0A0J9YY99 117 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 MRPS12O15235 138 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 RPL39P62891 51 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 CDSNQ15517 529 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 NEXN-AS1Q8NBZ9 246 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 TOMM6Q96B49 74 aa5.67□□□□□ -1.5
SYNPO2-203ENST00000434046 UBE2D1P51668 147 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 PMVKQ15126 192 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 LINC01620Q4KN68 170 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 CHCHD5Q9BSY4 110 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 MOB4Q9Y3A3 225 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 MAP1AP78559 2803 aaPredicted RBP5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 TRAV8-3A0A0A6YYJ7 113 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 H3BUX3 64 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 CRYGBP07316 175 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 DUX3Q96PT4 197 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 ZFYVE26Q68DK2 2539 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 CCDC168Q8NDH2 2452 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 IGLV2-18A0A075B6J9 118 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 DEFB1P60022 68 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 UBE2D3P61077 147 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 UBE2D2P62837 147 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 SMAD5-AS1Q9Y6J3 95 aa5.66□□□□□ -1.5
SYNPO2-203ENST00000434046 NAV2Q8IVL1 2488 aa5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 TRAV41A0A0B4J266 112 aa5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 ATP6V0E1O15342 81 aa5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 CTSGP08311 255 aa5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 C9orf153Q5TBE3 101 aa5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 MUSTN1Q8IVN3 82 aa5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 FANCD2OSQ96PS1 177 aa5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 USP9YO00507 2555 aaPredicted RBP5.65□□□□□ -1.5
SYNPO2-203ENST00000434046 TRAV21A0A0B4J279 112 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 B4DSR2 109 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 G3V318 75 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 HTN1P15515 57 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 ADGRG4Q8IZF6 3080 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 IGLV11-55A0A075B6I3 123 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 A0A0U1RRA0 63 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 PPP1R17O96001 155 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 IGKV3-20P01619 116 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 CD7P09564 240 aa5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 ZFP36P26651 326 aaKnown RBP5.65□□□□□ -1.51
SYNPO2-203ENST00000434046 GNRH2O43555 120 aa5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 SRD5A1P18405 259 aa5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 YAE1D1Q9NRH1 226 aa5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 IGHV1-69DA0A0B4J2H0 117 aa5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 IGHV1-69P01742 117 aa5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 IGF1P05019 195 aa5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 MRPL23Q16540 153 aaKnown RBP5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 OPRPNQ99935 248 aaPredicted RBP5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 CNFNQ9BYD5 112 aa5.64□□□□□ -1.51
SYNPO2-203ENST00000434046 LINC01619G3V211 115 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 M0R2P5 195 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 MSMBP08118 114 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 LY6G5BQ8NDX9 201 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 COL27A1Q8IZC6 1860 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 FAM236AA0A1B0GUQ0 79 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 FAM236BA0A1B0GV22 79 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 IGHV3-30P01768 117 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 NHLRC4P0CG21 123 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 IGHV3-30-5P0DP03 117 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 FAM110DQ8TAY7 271 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 FAM110AQ9BQ89 295 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 PRORYQ9H606 182 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 SORL1Q92673 2214 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 IGHV7-4-1A0A0J9YVY3 117 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 SDHAF1A6NFY7 115 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 C19orf84I3L1E1 186 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 VCYO14598 125 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 IGHV3-33P01772 117 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 SLC25A29Q8N8R3 303 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 PKD1L2Q7Z442 2459 aa5.63□□□□□ -1.51
SYNPO2-203ENST00000434046 IGHV4-61A0A0C4DH41 118 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 F6UB75 175 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 TNFRSF13BO14836 293 aaPredicted RBP5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 BUB3O43684 328 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 DSCR9P59020 149 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 MAPK1IP1LQ8NDC0 245 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 CLEC2BQ92478 149 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 RBAKDNA6NC62 111 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 ID1P41134 155 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
SYNPO2-203ENST00000434046 NPBQ8NG41 125 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms