RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 CXCL1P09341 107 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 DNAH10OSP0CZ25 163 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 RPL22P35268 128 aaKnown RBP3.35□□□□□ -1.87
LINC00348-201ENST00000428761 DYNLT3P51808 116 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 HBBP68871 147 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 ZNF816Q0VGE8 651 aaPredicted RBP3.35□□□□□ -1.87
LINC00348-201ENST00000428761 FUT5Q11128 374 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 KISS1Q15726 138 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 ALKAL2Q6UX46 152 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 MIR17HGQ75NE6 70 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 Q8N9L7 120 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 MUC7Q8TAX7 377 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 CIB3Q96Q77 187 aaPredicted RBP3.35□□□□□ -1.87
LINC00348-201ENST00000428761 TMEM191AQ9H0A3 160 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 C16orf95Q9H693 158 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 FKBP11Q9NYL4 201 aa3.35□□□□□ -1.87
LINC00348-201ENST00000428761 ZNF443Q9Y2A4 671 aaPredicted RBP3.35□□□□□ -1.87
LINC00348-201ENST00000428761 MYLKQ15746 1914 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 ABCA13Q86UQ4 5058 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 IGKV1D-37A0A075B6S9 117 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 COLCA2A8K830 154 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 IGKV1-16P04430 117 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 IL4P05112 153 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 RNASE4P34096 147 aaKnown RBP3.34□□□□□ -1.87
LINC00348-201ENST00000428761 ZNF93P35789 620 aaPredicted RBP3.34□□□□□ -1.87
LINC00348-201ENST00000428761 AQP4P55087 323 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 Q6P435 159 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 C22orf39Q6P5X5 142 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 FOXI2Q6ZQN5 318 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 PSMF1Q92530 271 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 MRPS24Q96EL2 167 aaKnown RBP3.34□□□□□ -1.87
LINC00348-201ENST00000428761 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 HIST1H2BLQ99880 126 aa3.34□□□□□ -1.87
LINC00348-201ENST00000428761 PDCD11Q14690 1871 aaKnown RBP3.34□□□□□ -1.87
LINC00348-201ENST00000428761 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.88
LINC00348-201ENST00000428761 SACSQ9NZJ4 4579 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 MYH1P12882 1939 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 TRGV10A0A0A0MS01 117 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 IGHV3-15A0A0B4J1V0 119 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 A0A0J9YW62 118 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 FAM236AA0A1B0GUQ0 79 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 FAM236BA0A1B0GV22 79 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 MDFIC2A0A1B0GVS7 189 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 G3V3Q6 166 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 H3BQ85 93 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 SOD1P00441 154 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 GZMBP10144 247 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 CD24P25063 80 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 LGALSLQ3ZCW2 172 aaPredicted RBP3.33□□□□□ -1.88
LINC00348-201ENST00000428761 KHDC3LQ587J8 217 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
LINC00348-201ENST00000428761 ST20-AS1Q8NBB2 130 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 APCDD1LQ8NCL9 501 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 DPY30Q9C005 99 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 BANF2Q9H503 90 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 CCDC167Q9P0B6 97 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 MARCOQ9UEW3 520 aaPredicted RBP3.33□□□□□ -1.88
LINC00348-201ENST00000428761 NOP16Q9Y3C1 178 aaKnown RBP3.33□□□□□ -1.88
LINC00348-201ENST00000428761 IER3IP1Q9Y5U9 82 aa3.33□□□□□ -1.88
LINC00348-201ENST00000428761 DSCAMO60469 2012 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 DIDO1Q9BTC0 2240 aaKnown RBP3.32□□□□□ -1.88
LINC00348-201ENST00000428761 A0A1W2PNU3 283 aaPredicted RBP3.32□□□□□ -1.88
LINC00348-201ENST00000428761 A0A1W2PQD3 144 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 NCR2O95944 276 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 IGLC1P0CG04 106 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 IFITM1P13164 125 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 FABP4P15090 132 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 DEFB109BQ30KR1 87 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 FAM229BQ4G0N7 80 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 LINC00301Q8NCQ3 95 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 KLF14Q8TD94 323 aaPredicted RBP3.32□□□□□ -1.88
LINC00348-201ENST00000428761 ZNF431Q8TF32 576 aaPredicted RBP3.32□□□□□ -1.88
LINC00348-201ENST00000428761 SDF2Q99470 211 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 SPANXDQ9BXN6 97 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 NPCDR1Q9BY65 106 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 DUSP21Q9H596 190 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 RPRMQ9NS64 109 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 POLEQ07864 2286 aa3.32□□□□□ -1.88
LINC00348-201ENST00000428761 SHANK1Q9Y566 2161 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 IGLV3-16A0A075B6K0 115 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 A0A087WXM4 84 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 A0A0D9SG52 128 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 OR2T8A6NH00 312 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 C17orf98A8MV24 154 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 RER1O15258 196 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 NDUFB3O43676 98 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 CREBL2O60519 120 aaPredicted RBP3.31□□□□□ -1.88
LINC00348-201ENST00000428761 KLF7O75840 302 aaPredicted RBP3.31□□□□□ -1.88
LINC00348-201ENST00000428761 MT-ND6P03923 174 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 XCL1P47992 114 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 PLGLB1Q02325 96 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 ZNF117Q03924 483 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 KLRD1Q13241 179 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 LINC00483Q53H64 154 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.31□□□□□ -1.88
LINC00348-201ENST00000428761 UNQ5815/PRO19632Q6UWF5 114 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 EPDR1Q9UM22 224 aa3.31□□□□□ -1.88
LINC00348-201ENST00000428761 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms