RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZFP2Q6ZN57 461 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 OR10G7Q8NGN6 311 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 DYNC2LI1Q8TCX1 351 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 RPL36ALQ969Q0 106 aaKnown RBP3.81□□□□□ -1.8
SDCBP-203ENST00000424270 RETNLBQ9BQ08 111 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 PARLQ9H300 379 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 Q9UF83 564 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 TRBV6-8A0A0A6YYG3 113 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 C5orf52A6NGY3 159 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 K7EPK0 472 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 S100A4P26447 101 aaKnown RBP3.8□□□□□ -1.8
SDCBP-203ENST00000424270 RAB2AP61019 212 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 VBP1P61758 197 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 REG3AQ06141 175 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 GAGE6Q13070 117 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 TMEM229BQ8NBD8 167 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 HYLS1Q96M11 299 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 SCGB3A2Q96PL1 93 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 NMES1Q9C002 83 aa3.8□□□□□ -1.8
SDCBP-203ENST00000424270 H0Y9J4 135 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 PTTG1IPP53801 180 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 LSM3P62310 102 aaKnown RBP3.79□□□□□ -1.8
SDCBP-203ENST00000424270 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 MIC13Q5XKP0 118 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 MCFD2Q8NI22 146 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 MGST2Q99735 147 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 SLIRPQ9GZT3 109 aaKnown RBP3.79□□□□□ -1.8
SDCBP-203ENST00000424270 GFRA4Q9GZZ7 299 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 TREM1Q9NP99 234 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 TMEM14CQ9P0S9 112 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 GPR132Q9UNW8 380 aa3.79□□□□□ -1.8
SDCBP-203ENST00000424270 TRAV8-4A0A0B4J246 113 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 DUXBA0A1W2PPF3 345 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 RBAKDNA6NC62 111 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 RHODO00212 210 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 PFDN1O60925 122 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 P01737 135 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 APOA1P02647 267 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 IGLV7-43P04211 117 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 NBEAP1P0C6P0 100 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 GZMBP10144 247 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 SULT1A2P50226 295 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 NCS1P62166 190 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 RANP62826 216 aaKnown RBP3.78□□□□□ -1.8
SDCBP-203ENST00000424270 RBX1P62877 108 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 GAGE2BQ13066 116 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 COTL1Q14019 142 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 IL18Q14116 193 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 RGS21Q2M5E4 152 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 Q6ZNX1 250 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 NRARPQ7Z6K4 114 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 CMTM2Q8TAZ6 248 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 PRRT1Q99946 306 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 NDFIP1Q9BT67 221 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 MCUBQ9NWR8 336 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 MTFP1Q9UDX5 166 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 PHLDA3Q9Y5J5 127 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 LENEPQ9Y5L5 61 aa3.78□□□□□ -1.8
SDCBP-203ENST00000424270 IGLV7-46A0A075B6I9 117 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 TRBV7-3A0A075B6L6 115 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 A0A087WZ39 114 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 IGKV3OR2-268A0A0C4DH90 116 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 A0A1B0GVG6 124 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 FNDC10F2Z333 226 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 K7EQM0 130 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 HPGDSO60760 199 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 EIF3GO75821 320 aaKnown RBP eCLIP3.77□□□□□ -1.81
SDCBP-203ENST00000424270 SLC25A6P12236 298 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 BAXQ07812 192 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 ARL16Q0P5N6 197 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 SPANXN2Q5MJ10 180 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 KRTAP26-1Q6PEX3 210 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 LINC00337Q8N6G1 96 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 AP3S1Q92572 193 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 JPT2Q9H910 190 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 PRR34Q9NV39 138 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 SCP2D1Q9UJQ7 156 aa3.77□□□□□ -1.81
SDCBP-203ENST00000424270 GAGE12HA6NDE8 117 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 FAM24AA6NFZ4 105 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 UPK1BO75841 260 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 AKAIN1P0CW23 69 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 TGFBR1P36897 503 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 RPS19P39019 145 aaKnown RBP3.76□□□□□ -1.81
SDCBP-203ENST00000424270 AMTP48728 403 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 DEFA1P59665 94 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 DEFA3P59666 94 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 UBE2D3P61077 147 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 UBE2D2P62837 147 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 TPRXLQ17RH7 258 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 FAM162BQ5T6X4 162 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 PRR27Q6MZM9 219 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 PHYHIPLQ96FC7 376 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 CCDC32Q9BV29 185 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 MIXL1Q9H2W2 232 aa3.76□□□□□ -1.81
SDCBP-203ENST00000424270 TRBV25-1A0A075B6N4 114 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 TRBV10-1A0A0K0K1A3 114 aa3.75□□□□□ -1.81
SDCBP-203ENST00000424270 M0R2T5 61 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms