RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 Q6ZSV7 163 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 ORMDL3Q8N138 153 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 PRSS3P2Q8NHM4 247 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 SMR3AQ99954 134 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 A0A096LNJ9 63 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 LOC389332A0A1B0GUA5 103 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 DEFB1P60022 68 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 CACNG7P62955 275 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 FAM19A4Q96LR4 140 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 LINC01619G3V211 115 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 PRR9Q5T870 116 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
CMTM3-202ENST00000424011 K7ERJ3 54 aa12.42□□□□□ -0.42
CMTM3-202ENST00000424011 WFDC3Q8IUB2 231 aa12.42□□□□□ -0.42
CMTM3-202ENST00000424011 APRG1Q8IVJ8 170 aa12.42□□□□□ -0.42
CMTM3-202ENST00000424011 RNF185Q96GF1 192 aa12.42□□□□□ -0.42
CMTM3-202ENST00000424011 PEMTQ9UBM1 199 aa12.42□□□□□ -0.42
CMTM3-202ENST00000424011 CYSLTR1Q9Y271 337 aa12.42□□□□□ -0.42
CMTM3-202ENST00000424011 CKS2P33552 79 aa12.41□□□□□ -0.42
CMTM3-202ENST00000424011 INSL3P51460 131 aa12.41□□□□□ -0.42
CMTM3-202ENST00000424011 H3BMG7 143 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 NPYP01303 97 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 KHDC1LQ5JSQ8 128 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 ERG28Q9UKR5 140 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 F6UB75 175 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 K7EQG2 157 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 LY6G6DO95868 133 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
CMTM3-202ENST00000424011 IGLL5B9A064 214 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 J3KRW8 73 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 ESM1Q9NQ30 184 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 NHP2Q9NX24 153 aaKnown RBP12.39□□□□□ -0.43
CMTM3-202ENST00000424011 SS18L2Q9UHA2 77 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 C20orf78Q9BR46 151 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 PRO0461Q9UI25 63 aa12.39□□□□□ -0.43
CMTM3-202ENST00000424011 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
CMTM3-202ENST00000424011 SLURP1P55000 103 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 PSMG4Q5JS54 123 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 RNF183Q96D59 192 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 ODF3Q96PU9 254 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 CDIP1Q9H305 208 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 ZNF688P0C7X2 276 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
CMTM3-202ENST00000424011 DEFB136Q30KP8 78 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 C18orf65Q6ZTR6 163 aa12.38□□□□□ -0.43
CMTM3-202ENST00000424011 CUBNO60494 3623 aa12.37□□□□□ -0.43
CMTM3-202ENST00000424011 IGHV4-4A0A075B6R2 117 aa12.37□□□□□ -0.43
CMTM3-202ENST00000424011 LEPP41159 167 aa12.37□□□□□ -0.43
CMTM3-202ENST00000424011 CEND1Q8N111 149 aa12.37□□□□□ -0.43
CMTM3-202ENST00000424011 KLLNB2CW77 178 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 FXYD7P58549 80 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 C16orf95Q9H693 158 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 DUSP14O95147 198 aaKnown RBP12.36□□□□□ -0.43
CMTM3-202ENST00000424011 APOMO95445 188 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 MED14OSP0DP75 135 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 EVI2AP22794 236 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 ASIPP42127 132 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 SPANXN1Q5VSR9 72 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 SHISA2Q6UWI4 295 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 IFI27L1Q96BM0 104 aa12.36□□□□□ -0.43
CMTM3-202ENST00000424011 HIVEP2P31629 2446 aa12.35□□□□□ -0.43
CMTM3-202ENST00000424011 FLNBO75369 2602 aaKnown RBP12.35□□□□□ -0.43
CMTM3-202ENST00000424011 TRAV2A0A0B4J234 112 aa12.35□□□□□ -0.43
CMTM3-202ENST00000424011 A0A0J9YX75 114 aa12.35□□□□□ -0.43
CMTM3-202ENST00000424011 HBDP02042 147 aa12.35□□□□□ -0.43
CMTM3-202ENST00000424011 S100A4P26447 101 aaKnown RBP12.35□□□□□ -0.43
CMTM3-202ENST00000424011 FOXI1Q12951 378 aa12.35□□□□□ -0.43
CMTM3-202ENST00000424011 MT-ATP8P03928 68 aa12.34□□□□□ -0.43
CMTM3-202ENST00000424011 A0A1B0GWB2 263 aa12.34□□□□□ -0.43
CMTM3-202ENST00000424011 H3BVH4 76 aa12.34□□□□□ -0.43
CMTM3-202ENST00000424011 GATA1P15976 413 aaPredicted RBP12.34□□□□□ -0.43
CMTM3-202ENST00000424011 GAGE5Q13069 117 aa12.34□□□□□ -0.43
CMTM3-202ENST00000424011 GAGE6Q13070 117 aa12.34□□□□□ -0.43
CMTM3-202ENST00000424011 AMTNQ6UX39 209 aa12.34□□□□□ -0.43
CMTM3-202ENST00000424011 ATP6V0E2Q8NHE4 81 aa12.34□□□□□ -0.43
CMTM3-202ENST00000424011 MTORP42345 2549 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 Q6ZUT4 128 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 DKK2Q9UBU2 259 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 TRBV25-1A0A075B6N4 114 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 TNFRSF6BO95407 300 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 HILS1P60008 231 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
CMTM3-202ENST00000424011 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
CMTM3-202ENST00000424011 DYNLRB2Q8TF09 96 aa12.32□□□□□ -0.44
CMTM3-202ENST00000424011 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
CMTM3-202ENST00000424011 MAP1LC3AQ9H492 121 aa12.32□□□□□ -0.44
CMTM3-202ENST00000424011 SPRY2O43597 315 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 XGP55808 180 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 C12orf74Q32Q52 190 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms