RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 IGLC1P0CG04 106 aa14.35□□□□□ -0.11
SHANK3-202ENST00000414786 CEMP1Q6PRD7 247 aaPredicted RBP14.35□□□□□ -0.11
SHANK3-202ENST00000414786 ZNF491Q8N8L2 437 aa14.35□□□□□ -0.11
SHANK3-202ENST00000414786 CTSZQ9UBR2 303 aa14.35□□□□□ -0.11
SHANK3-202ENST00000414786 TEX49A0A1B0GTD5 131 aa14.35□□□□□ -0.11
SHANK3-202ENST00000414786 ADCYAP1P18509 176 aa14.35□□□□□ -0.11
SHANK3-202ENST00000414786 IGF2-ASQ6U949 168 aa14.35□□□□□ -0.11
SHANK3-202ENST00000414786 TRBV12-3P01733 135 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 DAZ2Q13117 558 aaKnown RBP14.34□□□□□ -0.11
SHANK3-202ENST00000414786 DAZ4Q86SG3 579 aaKnown RBP14.34□□□□□ -0.11
SHANK3-202ENST00000414786 DAZ3Q9NR90 486 aaKnown RBP14.34□□□□□ -0.11
SHANK3-202ENST00000414786 P0DMU3 169 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 FAM231AP0DMU4 169 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 FAM231CP0DMU5 169 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 C9orf85Q96MD7 179 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 RETNLBQ9BQ08 111 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 WI2-2373I1.2A0A1W2PRP0 233 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 COX8AP10176 69 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 MSRB1Q9NZV6 116 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 V9GYV3 84 aa14.34□□□□□ -0.11
SHANK3-202ENST00000414786 DENND4AQ7Z401 1863 aa14.33□□□□□ -0.11
SHANK3-202ENST00000414786 K7EP34 96 aa14.33□□□□□ -0.12
SHANK3-202ENST00000414786 Q8TCH9 128 aa14.33□□□□□ -0.12
SHANK3-202ENST00000414786 TNRC6AQ8NDV7 1962 aaKnown RBP14.33□□□□□ -0.12
SHANK3-202ENST00000414786 C9JQL5 133 aa14.33□□□□□ -0.12
SHANK3-202ENST00000414786 LINC00269Q8N2A0 174 aa14.33□□□□□ -0.12
SHANK3-202ENST00000414786 LINC00482Q8N8I6 264 aa14.33□□□□□ -0.12
SHANK3-202ENST00000414786 DCANP1Q8TF63 244 aa14.32□□□□□ -0.12
SHANK3-202ENST00000414786 TRBV10-2A0A0K0K1G8 114 aa14.32□□□□□ -0.12
SHANK3-202ENST00000414786 ZNF726P1Q15940 193 aa14.32□□□□□ -0.12
SHANK3-202ENST00000414786 USP17L23D6RBM5 183 aa14.32□□□□□ -0.12
SHANK3-202ENST00000414786 A4D1N5 150 aa14.32□□□□□ -0.12
SHANK3-202ENST00000414786 C2orf70A6NJV1 201 aa14.32□□□□□ -0.12
SHANK3-202ENST00000414786 WT1P19544 449 aaPredicted RBP14.32□□□□□ -0.12
SHANK3-202ENST00000414786 QRFPP83859 136 aa14.31□□□□□ -0.12
SHANK3-202ENST00000414786 TRBV6-6A0A0A6YYG2 114 aa14.31□□□□□ -0.12
SHANK3-202ENST00000414786 MIR7-3HGQ8N6C7 128 aa14.31□□□□□ -0.12
SHANK3-202ENST00000414786 TRBV7-3A0A075B6L6 115 aa14.31□□□□□ -0.12
SHANK3-202ENST00000414786 CFPP27918 469 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 LGALS9BQ3B8N2 356 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 LGALS9CQ6DKI2 356 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 TRAV23DV6A0A075B6W5 121 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 FAM236AA0A1B0GUQ0 79 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 FAM236BA0A1B0GV22 79 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 K7ERS5 55 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 CACNA1HO95180 2353 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 IGLV9-49A0A0B4J1Y8 123 aa14.3□□□□□ -0.12
SHANK3-202ENST00000414786 FGF23Q9GZV9 251 aaPredicted RBP14.3□□□□□ -0.12
SHANK3-202ENST00000414786 MED12LQ86YW9 2145 aa14.29□□□□□ -0.12
SHANK3-202ENST00000414786 DNAJC9-AS1A6NH13 148 aa14.29□□□□□ -0.12
SHANK3-202ENST00000414786 C20orf78Q9BR46 151 aa14.29□□□□□ -0.12
SHANK3-202ENST00000414786 DEFB131BA0A096LNP1 70 aa14.29□□□□□ -0.12
SHANK3-202ENST00000414786 TMEM263Q8WUH6 116 aaKnown RBP14.29□□□□□ -0.12
SHANK3-202ENST00000414786 FNDC10F2Z333 226 aa14.29□□□□□ -0.12
SHANK3-202ENST00000414786 IGHV2-70P01814 119 aa14.29□□□□□ -0.12
SHANK3-202ENST00000414786 Q0VG73 95 aa14.28□□□□□ -0.12
SHANK3-202ENST00000414786 FHL1Q13642 323 aa14.28□□□□□ -0.12
SHANK3-202ENST00000414786 K7EN84 100 aa14.27□□□□□ -0.12
SHANK3-202ENST00000414786 PRAC2D3DTV9 90 aa14.27□□□□□ -0.13
SHANK3-202ENST00000414786 C15orf65H3BRN8 121 aa14.27□□□□□ -0.13
SHANK3-202ENST00000414786 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.27□□□□□ -0.13
SHANK3-202ENST00000414786 TMEM14CQ9P0S9 112 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 IGHV7-81A0A0B4J1V7 117 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 A0A0U1RQV1 116 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 NDUFC2O95298 119 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 MDFICQ9P1T7 246 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 COX7BP24311 80 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 C7orf33Q8WU49 177 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 SPANXA1Q9NS26 97 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 SLPIP03973 132 aa14.26□□□□□ -0.13
SHANK3-202ENST00000414786 A0A0B4J2C4 111 aa14.25□□□□□ -0.13
SHANK3-202ENST00000414786 TTTY13Q9BZ97 58 aa14.25□□□□□ -0.13
SHANK3-202ENST00000414786 RIF1Q5UIP0 2472 aaKnown RBP14.24□□□□□ -0.13
SHANK3-202ENST00000414786 PROK2Q9HC23 129 aa14.24□□□□□ -0.13
SHANK3-202ENST00000414786 IL17DQ8TAD2 202 aa14.24□□□□□ -0.13
SHANK3-202ENST00000414786 LINC00526Q96FQ7 95 aa14.24□□□□□ -0.13
SHANK3-202ENST00000414786 IGKV2-28A0A075B6P5 120 aa14.24□□□□□ -0.13
SHANK3-202ENST00000414786 IGKV2D-28P01615 120 aa14.24□□□□□ -0.13
SHANK3-202ENST00000414786 HILS1P60008 231 aa14.24□□□□□ -0.13
SHANK3-202ENST00000414786 C17orf82Q86X59 251 aaPredicted RBP14.23□□□□□ -0.13
SHANK3-202ENST00000414786 LINC00173Q6ZV60 143 aa14.23□□□□□ -0.13
SHANK3-202ENST00000414786 C11orf52Q96A22 123 aa14.23□□□□□ -0.13
SHANK3-202ENST00000414786 IGFL3Q6UXB1 125 aa14.23□□□□□ -0.13
SHANK3-202ENST00000414786 PRR4Q16378 134 aa14.23□□□□□ -0.13
SHANK3-202ENST00000414786 CRYGBP07316 175 aa14.22□□□□□ -0.13
SHANK3-202ENST00000414786 ADORA2A-AS1P86434 159 aa14.22□□□□□ -0.13
SHANK3-202ENST00000414786 LYL1P12980 280 aa14.22□□□□□ -0.13
SHANK3-202ENST00000414786 C4orf3Q8WVX3 66 aa14.22□□□□□ -0.13
SHANK3-202ENST00000414786 TP53TG3Q9ULZ0 132 aa14.22□□□□□ -0.13
SHANK3-202ENST00000414786 C5orf56Q8N8D9 126 aa14.22□□□□□ -0.13
SHANK3-202ENST00000414786 PLXNB1O43157 2135 aa14.22□□□□□ -0.13
SHANK3-202ENST00000414786 PLA2G2EQ9NZK7 142 aa14.21□□□□□ -0.13
SHANK3-202ENST00000414786 LGALS9O00182 355 aa14.21□□□□□ -0.13
SHANK3-202ENST00000414786 H3BUA1 57 aa14.21□□□□□ -0.13
SHANK3-202ENST00000414786 IGF1P05019 195 aa14.21□□□□□ -0.14
SHANK3-202ENST00000414786 FAM222AQ5U5X8 452 aa14.21□□□□□ -0.14
SHANK3-202ENST00000414786 XAGE1AQ9HD64 81 aa14.21□□□□□ -0.14
SHANK3-202ENST00000414786 C10orf105Q8TEF2 133 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 U3KQA8 63 aa14.2□□□□□ -0.14
SHANK3-202ENST00000414786 FRMPD3Q5JV73 1810 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms