RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 Q86TA4 180 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 APRG1Q8IVJ8 170 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 CEND1Q8N111 149 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 ZNF738Q8NE65 137 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 OR8A1Q8NGG7 326 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 CMTM2Q8TAZ6 248 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 TVP23CQ96ET8 276 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 SMIM12Q96EX1 92 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 FMC1Q96HJ9 113 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 ODF3Q96PU9 254 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 AGPAT4-IT1Q9H0P7 198 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 ZNF492Q9P255 531 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 PSG8Q9UQ74 426 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 RBMY1BA6NDE4 496 aaKnown RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 RBMY1EA6NEQ0 496 aaKnown RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 F8W036 122 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 K7EN84 100 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 K7EQM0 130 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 GCGP01275 180 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 CD7P09564 240 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 RBMY1DP0C7P1 496 aaKnown RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 ZNF705DP0CH99 300 aaPredicted RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 ZNF705BP0CI00 300 aaPredicted RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 HLA-DRB4P13762 266 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 CRISP2P16562 243 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 GNG4P50150 75 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 CMC4P56277 68 aaPredicted RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 DEFB131AP59861 70 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 RPL23P62829 140 aaKnown RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 FLI1Q01543 452 aaPredicted RBP2.85□□□□□ -1.95
CLK1-203ENST00000409769 ERCC8Q13216 396 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 GUCA2BQ16661 112 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 CENPWQ5EE01 88 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 AMTNQ6UX39 209 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 LINC01551Q86U37 167 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 TMEM183AQ8IXX5 376 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 ZFAND2AQ8N6M9 145 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 Q8TAT8 98 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 LINC00477Q96M19 166 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 SMIM7Q9BQ49 75 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 GPR61Q9BZJ8 451 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 NAT8Q9UHE5 227 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 RPH3ALQ9UNE2 315 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 ZFP30Q9Y2G7 519 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 LENEPQ9Y5L5 61 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 HLA-DRB4X5D2U9 266 aa2.85□□□□□ -1.95
CLK1-203ENST00000409769 C19orf71A6NCJ1 209 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 KNCNA6PVL3 124 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 OR11H12B2RN74 326 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 H3BMM0 161 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 CRXO43186 299 aaPredicted RBP2.84□□□□□ -1.95
CLK1-203ENST00000409769 S100A1P23297 94 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 CRIP1P50238 77 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 ZNF80P51504 273 aaPredicted RBP2.84□□□□□ -1.95
CLK1-203ENST00000409769 ZNF138P52744 262 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 CEBPGP53567 150 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 UBE2G1P62253 170 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 RPL32P62910 135 aaKnown RBP2.84□□□□□ -1.95
CLK1-203ENST00000409769 HIST1H1AQ02539 215 aaPredicted RBP2.84□□□□□ -1.95
CLK1-203ENST00000409769 OR5I1Q13606 314 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 TMEM241Q24JQ0 296 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 ACTL10Q5JWF8 245 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 SAPCD1Q5SSQ6 148 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 KPRPQ5T749 579 aaPredicted RBP2.84□□□□□ -1.95
CLK1-203ENST00000409769 PRR9Q5T870 116 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 Q6AWC8 147 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 EBLN2Q6P2I7 272 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 LINC00322Q6ZN03 302 aaPredicted RBP2.84□□□□□ -1.95
CLK1-203ENST00000409769 FAM231DQ6ZW35 169 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 PRNTQ86SH4 94 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 BAGE2Q86Y30 109 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 OR10J6PQ8NGY7 276 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 ISOC2Q96AB3 205 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 ZC2HC1AQ96GY0 325 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 NIPSNAP3BQ9BS92 247 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 WFDC10AQ9H1F0 79 aa2.84□□□□□ -1.95
CLK1-203ENST00000409769 MGAM2Q2M2H8 2515 aa2.84□□□□□ -1.96
CLK1-203ENST00000409769 MUC4Q99102 2169 aa2.84□□□□□ -1.96
CLK1-203ENST00000409769 A0A087WWC5 75 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 C7orf77A4D0Y5 90 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 B4DEV8 164 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 G3V4G9 280 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 ZNF324O75467 553 aaPredicted RBP2.83□□□□□ -1.96
CLK1-203ENST00000409769 APOC3P02656 99 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 PFN1P07737 140 aaKnown RBP2.83□□□□□ -1.96
CLK1-203ENST00000409769 RBMY1A1P0DJD3 496 aaKnown RBP2.83□□□□□ -1.96
CLK1-203ENST00000409769 RBMY1CP0DJD4 496 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 CDKN1BP46527 198 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 RHEBQ15382 184 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 RBMY1FQ15415 496 aaKnown RBP2.83□□□□□ -1.96
CLK1-203ENST00000409769 ADIRFQ15847 76 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 TMEM78Q5T7P6 136 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 SVBPQ8N300 66 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 C16orf74Q96GX8 76 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 BIN3Q9NQY0 253 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 V9GYV3 84 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 NACAE9PAV3 2078 aa2.83□□□□□ -1.96
CLK1-203ENST00000409769 NOTCH1P46531 2555 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms