RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
SCAMP4-202ENST00000409472 K7EMT4 169 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 M0R381 172 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 ZNF688P0C7X2 276 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 SH2D6Q7Z4S9 175 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 MUC4Q99102 2169 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 GNRH2O43555 120 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 FXYD2P54710 66 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 TCTAP57738 103 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 CACNG7P62955 275 aa11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 PHLDA1Q8WV24 401 aaPredicted RBP11.38□□□□□ -0.59
SCAMP4-202ENST00000409472 HBDP02042 147 aa11.37□□□□□ -0.59
SCAMP4-202ENST00000409472 GAGE5Q13069 117 aa11.37□□□□□ -0.59
SCAMP4-202ENST00000409472 GAGE6Q13070 117 aa11.37□□□□□ -0.59
SCAMP4-202ENST00000409472 PCP2Q8IVA1 136 aa11.37□□□□□ -0.59
SCAMP4-202ENST00000409472 WFDC11Q8NEX6 87 aa11.37□□□□□ -0.59
SCAMP4-202ENST00000409472 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
SCAMP4-202ENST00000409472 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
SCAMP4-202ENST00000409472 TRAV21A0A0B4J279 112 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 NRACQ8N912 160 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 MYOZ3Q8TDC0 251 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 ACANP16112 2415 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 APOMO95445 188 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 LGALS1P09382 135 aaKnown RBP11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 ATP6V0E2Q8NHE4 81 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 RNF183Q96D59 192 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 NHP2Q9NX24 153 aaKnown RBP11.36□□□□□ -0.59
SCAMP4-202ENST00000409472 H3BMG7 143 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 IGKV3-20P01619 116 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 APRG1Q8IVJ8 170 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 FAM110AQ9BQ89 295 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 FASNP49327 2511 aaKnown RBP11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 IGLV2-18A0A075B6J9 118 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 IGLL5B9A064 214 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 K7ERJ3 54 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 DUX3Q96PT4 197 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 ANAPC13Q9BS18 74 aa11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 GCN1Q92616 2671 aaKnown RBP11.35□□□□□ -0.59
SCAMP4-202ENST00000409472 RNASE3P12724 160 aaKnown RBP11.34□□□□□ -0.59
SCAMP4-202ENST00000409472 SHISA2Q6UWI4 295 aa11.34□□□□□ -0.59
SCAMP4-202ENST00000409472 LRRC75A-AS1Q8N1F1 130 aa11.34□□□□□ -0.59
SCAMP4-202ENST00000409472 SYT8Q8NBV8 401 aa11.34□□□□□ -0.59
SCAMP4-202ENST00000409472 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
SCAMP4-202ENST00000409472 SETD2Q9BYW2 2564 aaPredicted RBP11.34□□□□□ -0.59
SCAMP4-202ENST00000409472 LEPP41159 167 aa11.34□□□□□ -0.59
SCAMP4-202ENST00000409472 TRAV12-2A0A075B6T6 113 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 TMEM89A2RUT3 159 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 KLLNB2CW77 178 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 ASIPP42127 132 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 SLURP1P55000 103 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 CEND1Q8N111 149 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 C14orf178Q8N769 122 aaPredicted RBP11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 A0A1B0GWB2 263 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 FOXI1Q12951 378 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 IFI27L1Q96BM0 104 aa11.33□□□□□ -0.6
SCAMP4-202ENST00000409472 TRAV12-3A0A0B4J271 114 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 LINC01546A6NGU7 62 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 ELANEP08246 267 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 Q6ZUT4 128 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 CDIP1Q9H305 208 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 VCX2Q9H322 139 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 PRO0461Q9UI25 63 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 ANK3Q12955 4377 aaKnown RBP11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 TRBV7-9A0A0J9YWB2 115 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 INSL3P51460 131 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 DKK2Q9UBU2 259 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
SCAMP4-202ENST00000409472 MTORP42345 2549 aa11.31□□□□□ -0.6
SCAMP4-202ENST00000409472 K7EQG2 157 aa11.31□□□□□ -0.6
SCAMP4-202ENST00000409472 UBE2E2Q96LR5 201 aa11.31□□□□□ -0.6
SCAMP4-202ENST00000409472 ID1P41134 155 aa11.31□□□□□ -0.6
SCAMP4-202ENST00000409472 TAL2Q16559 108 aa11.31□□□□□ -0.6
SCAMP4-202ENST00000409472 NXT2Q9NPJ8 142 aaKnown RBP11.31□□□□□ -0.6
SCAMP4-202ENST00000409472 MT-ATP8P03928 68 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 Q8N8P6 123 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 JPT2Q9H910 190 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 A0A0J9YX75 114 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 FCER1GP30273 86 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 HERV-K104P63124 156 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 RASL10AQ92737 203 aa11.3□□□□□ -0.6
SCAMP4-202ENST00000409472 UNC79Q9P2D8 2635 aa11.29□□□□□ -0.6
SCAMP4-202ENST00000409472 MGPP08493 103 aa11.29□□□□□ -0.6
SCAMP4-202ENST00000409472 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
SCAMP4-202ENST00000409472 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
SCAMP4-202ENST00000409472 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
SCAMP4-202ENST00000409472 TRBV25-1A0A075B6N4 114 aa11.28□□□□□ -0.6
SCAMP4-202ENST00000409472 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
SCAMP4-202ENST00000409472 Q8N2B8 174 aa11.28□□□□□ -0.6
SCAMP4-202ENST00000409472 LGALS9O00182 355 aa11.27□□□□□ -0.6
SCAMP4-202ENST00000409472 XGP55808 180 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms