RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CEACAM4O75871 244 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 NDUFA7O95182 113 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 FSTL3O95633 263 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 ACYP1P07311 99 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 P0DMU3 169 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 FAM231AP0DMU4 169 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 FAM231CP0DMU5 169 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 CCL4P13236 92 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 GP9P14770 177 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 ORM2P19652 201 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 SRSF9Q13242 221 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLK1-202ENST00000409403 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 DEFB133Q30KQ1 61 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 UTF1Q5T230 341 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 C9orf153Q5TBE3 101 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 SCGB1D4Q6XE38 83 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 AMN1Q8IY45 258 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 VKORC1L1Q8N0U8 176 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 Q8N8P6 123 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 OR13A1Q8NGR1 328 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 SGK494Q96LW2 274 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 PROCRQ9UNN8 238 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 TRRAPQ9Y4A5 3859 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 RYR1P21817 5038 aa4.17□□□□□ -1.74
CLK1-202ENST00000409403 IGHV3OR15-7A0A075B7D8 119 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 IGHV3-43A0A0B4J1X8 118 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 TRAV40A0A0B4J280 105 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 A4D1N5 150 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 DEFB108AA8MXU0 73 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 C9JAW5 83 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 PRAC2D3DTV9 90 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 H3BMM0 161 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 K7EMI3 77 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 NPFFO15130 113 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 IGHV3-43DP0DP04 118 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 SLC25A16P16260 332 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 B3GALT5-AS1P59052 145 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 TNFAIP6P98066 277 aaPredicted RBP4.16□□□□□ -1.74
CLK1-202ENST00000409403 LYZL1Q6UWQ5 148 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 PATE2Q6UY27 113 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 GOLT1AQ6ZVE7 132 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 C10orf126Q8N4M7 172 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 FAM57AQ8TBR7 257 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 UBE2WQ96B02 151 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 PRADC1Q9BSG0 188 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 FZR1Q9UM11 496 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 HIGD1AQ9Y241 93 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 TENM1Q9UKZ4 2725 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 IGLV5-45A0A087WSX0 123 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 IGHV1OR21-1A0A087WYE8 117 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 IGHV1-45A0A0A0MS14 117 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 TRAV8-1A0A0A6YYK1 113 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 C10orf142B7Z368 130 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 LMO7DNF2Z398 122 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 H3BT86 120 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 TCL1BO95988 128 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 TGFAP01135 160 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 IGHV4-39P01824 125 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 EMP1P54849 157 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 LAGE3Q14657 143 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 RPL39P5Q59GN2 51 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 COX8CQ7Z4L0 72 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 WDR86Q86TI4 376 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 NDUFA11Q86Y39 141 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 MAPKAPK5-AS1Q8N8E1 139 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 ZNRF2Q8NHG8 242 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 FLYWCH2Q96CP2 140 aaKnown RBP4.16□□□□□ -1.74
CLK1-202ENST00000409403 C17orf77Q96MU5 243 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 NDUFA4L2Q9NRX3 87 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 CALYQ9NYX4 217 aa4.16□□□□□ -1.74
CLK1-202ENST00000409403 MRPL35Q9NZE8 188 aaKnown RBP4.16□□□□□ -1.74
CLK1-202ENST00000409403 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.15□□□□□ -1.75
CLK1-202ENST00000409403 TRBV10-2A0A0K0K1G8 114 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 ZNF815PA8K554 130 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 IGLV2-11P01706 119 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 CD7P09564 240 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 CECR9P0C854 216 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 CCL3P10147 92 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 COL8A2P25067 703 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 PMVKQ15126 192 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 C11orf53Q8IXP5 236 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 RFESDQ8TAC1 157 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 LINC00526Q96FQ7 95 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 C21orf62Q9NYP8 219 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 PRO1854Q9UHT4 67 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 TANC2Q9HCD6 1990 aa4.15□□□□□ -1.75
CLK1-202ENST00000409403 IGKV1D-37A0A075B6S9 117 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 LGALS9O00182 355 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 SAA2P0DJI9 122 aaPredicted RBP4.14□□□□□ -1.75
CLK1-202ENST00000409403 LINC00694P0DN24 101 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 GLRXP35754 106 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 PDE6HQ13956 83 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 EDDM3AQ14507 147 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 ALKBH6Q3KRA9 238 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 ORMDL2Q53FV1 153 aa4.14□□□□□ -1.75
CLK1-202ENST00000409403 ZFP2Q6ZN57 461 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms