RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 DUX3Q96PT4 197 aa16.91■□□□□ 0.3
CUEDC1-202ENST00000407144 USP24Q9UPU5 2620 aa16.91■□□□□ 0.3
CUEDC1-202ENST00000407144 COX6CP09669 75 aa16.91■□□□□ 0.3
CUEDC1-202ENST00000407144 GPHB5Q86YW7 130 aa16.91■□□□□ 0.3
CUEDC1-202ENST00000407144 NUP37Q8NFH4 326 aa16.91■□□□□ 0.3
CUEDC1-202ENST00000407144 URB1O60287 2271 aaKnown RBP16.9■□□□□ 0.3
CUEDC1-202ENST00000407144 A0A0G2JNJ9 132 aa16.89■□□□□ 0.3
CUEDC1-202ENST00000407144 CTSGP08311 255 aa16.89■□□□□ 0.3
CUEDC1-202ENST00000407144 RNF182Q8N6D2 247 aa16.89■□□□□ 0.3
CUEDC1-202ENST00000407144 Q9UFV3 132 aa16.89■□□□□ 0.3
CUEDC1-202ENST00000407144 ICOSQ9Y6W8 199 aa16.89■□□□□ 0.3
CUEDC1-202ENST00000407144 CADP27708 2225 aa16.89■□□□□ 0.29
CUEDC1-202ENST00000407144 ITPR1Q14643 2758 aa16.89■□□□□ 0.29
CUEDC1-202ENST00000407144 TMEM219Q86XT9 240 aa16.89■□□□□ 0.29
CUEDC1-202ENST00000407144 OR13C6PQ8NH95 151 aa16.89■□□□□ 0.29
CUEDC1-202ENST00000407144 BEX4Q9NWD9 120 aaPredicted RBP16.89■□□□□ 0.29
CUEDC1-202ENST00000407144 BOD1L1Q8NFC6 3051 aa16.89■□□□□ 0.29
CUEDC1-202ENST00000407144 NBR2O15453 112 aa16.88■□□□□ 0.29
CUEDC1-202ENST00000407144 MED14OSP0DP75 135 aa16.88■□□□□ 0.29
CUEDC1-202ENST00000407144 LY6LH3BQJ8 138 aa16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 LENEPQ9Y5L5 61 aa16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 MBD3L4A6NDZ8 208 aaPredicted RBP16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 MBD3L3A6NE82 208 aaPredicted RBP16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 MBD3L5A6NJ08 208 aaPredicted RBP16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 LST1O00453 97 aa16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 LINC00643Q86TS7 51 aa16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 NPBQ8NG41 125 aa16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 MBD3L2Q8NHZ7 208 aaPredicted RBP16.87■□□□□ 0.29
CUEDC1-202ENST00000407144 PKD1L2Q7Z442 2459 aa16.86■□□□□ 0.29
CUEDC1-202ENST00000407144 BUB3O43684 328 aa16.86■□□□□ 0.29
CUEDC1-202ENST00000407144 IGHV4OR15-8A0A075B7B6 117 aa16.85■□□□□ 0.29
CUEDC1-202ENST00000407144 A0A087WW49 117 aa16.85■□□□□ 0.29
CUEDC1-202ENST00000407144 CEMP1Q6PRD7 247 aaPredicted RBP16.85■□□□□ 0.29
CUEDC1-202ENST00000407144 ZNF22P17026 224 aaPredicted RBP16.85■□□□□ 0.29
CUEDC1-202ENST00000407144 TRAV17A0A0B4J275 112 aa16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 MGPP08493 103 aa16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 SEM1Q6ZVN7 128 aa16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 CITED2Q99967 270 aaPredicted RBP16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 ZFAND3Q9H8U3 227 aa16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 CRYGAP11844 174 aa16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 COX7CP15954 63 aa16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 CXCL5P42830 114 aa16.84■□□□□ 0.29
CUEDC1-202ENST00000407144 POLR2KP53803 58 aaKnown RBP16.83■□□□□ 0.28
CUEDC1-202ENST00000407144 CCL17Q92583 94 aa16.83■□□□□ 0.28
CUEDC1-202ENST00000407144 ZNF256Q9Y2P7 627 aaPredicted RBP16.83■□□□□ 0.28
CUEDC1-202ENST00000407144 UBE2E1P51965 193 aa16.82■□□□□ 0.28
CUEDC1-202ENST00000407144 PTPRQQ9UMZ3 2332 aa16.82■□□□□ 0.28
CUEDC1-202ENST00000407144 PHLDA3Q9Y5J5 127 aa16.82■□□□□ 0.28
CUEDC1-202ENST00000407144 VCYO14598 125 aa16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 IGHV1-69P01742 117 aa16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 SDIM1Q6ZPB5 146 aa16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 UBTD1Q9HAC8 227 aa16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 LINC00527Q9UJ94 153 aa16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 SMG1Q96Q15 3661 aaKnown RBP16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 A0A0J9YXY3 114 aa16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 IGF2-ASQ6U949 168 aa16.81■□□□□ 0.28
CUEDC1-202ENST00000407144 IGHV3-23P01764 117 aa16.8■□□□□ 0.28
CUEDC1-202ENST00000407144 S100A4P26447 101 aaKnown RBP16.79■□□□□ 0.28
CUEDC1-202ENST00000407144 RPL39P62891 51 aaKnown RBP16.79■□□□□ 0.28
CUEDC1-202ENST00000407144 ADIPOQQ15848 244 aa16.79■□□□□ 0.28
CUEDC1-202ENST00000407144 C5orf38Q86SI9 138 aa16.79■□□□□ 0.28
CUEDC1-202ENST00000407144 PRR9Q5T870 116 aa16.78■□□□□ 0.28
CUEDC1-202ENST00000407144 GAGE2AQ6NT46 116 aa16.78■□□□□ 0.28
CUEDC1-202ENST00000407144 TRAV21A0A0B4J279 112 aa16.78■□□□□ 0.28
CUEDC1-202ENST00000407144 ZGRF1Q86YA3 2104 aa16.78■□□□□ 0.28
CUEDC1-202ENST00000407144 LITAFQ99732 161 aa16.78■□□□□ 0.28
CUEDC1-202ENST00000407144 COX7A1P24310 79 aa16.77■□□□□ 0.27
CUEDC1-202ENST00000407144 ATP1A1-AS1Q5TC04 95 aa16.77■□□□□ 0.27
CUEDC1-202ENST00000407144 KLK5Q9Y337 293 aaPredicted RBP16.77■□□□□ 0.27
CUEDC1-202ENST00000407144 ICE1Q9Y2F5 2266 aa16.77■□□□□ 0.27
CUEDC1-202ENST00000407144 ZFYVE26Q68DK2 2539 aa16.76■□□□□ 0.27
CUEDC1-202ENST00000407144 NXPH4O95158 308 aa16.76■□□□□ 0.27
CUEDC1-202ENST00000407144 PF4V1P10720 104 aa16.76■□□□□ 0.27
CUEDC1-202ENST00000407144 C2orf48Q96LS8 159 aa16.76■□□□□ 0.27
CUEDC1-202ENST00000407144 KIF25-AS1Q9Y6Z4 181 aa16.76■□□□□ 0.27
CUEDC1-202ENST00000407144 PIEZO2Q9H5I5 2752 aa16.76■□□□□ 0.27
CUEDC1-202ENST00000407144 DCANP1Q8TF63 244 aa16.75■□□□□ 0.27
CUEDC1-202ENST00000407144 CLEC2BQ92478 149 aa16.75■□□□□ 0.27
CUEDC1-202ENST00000407144 LINC00315P59091 139 aa16.75■□□□□ 0.27
CUEDC1-202ENST00000407144 PRB3Q04118 309 aaPredicted RBP16.75■□□□□ 0.27
CUEDC1-202ENST00000407144 SMCR5Q8TEV8 140 aa16.74■□□□□ 0.27
CUEDC1-202ENST00000407144 LINC00477Q96M19 166 aa16.74■□□□□ 0.27
CUEDC1-202ENST00000407144 IGHV3OR16-8A0A075B7F1 116 aa16.73■□□□□ 0.27
CUEDC1-202ENST00000407144 TRBV27A0A0K0K1C4 114 aa16.73■□□□□ 0.27
CUEDC1-202ENST00000407144 I3L3M4 83 aa16.73■□□□□ 0.27
CUEDC1-202ENST00000407144 EDA2RQ9HAV5 297 aa16.73■□□□□ 0.27
CUEDC1-202ENST00000407144 PLCE1Q9P212 2302 aa16.73■□□□□ 0.27
CUEDC1-202ENST00000407144 SPENQ96T58 3664 aaKnown RBP16.73■□□□□ 0.27
CUEDC1-202ENST00000407144 HIST1H4AP62805 103 aaKnown RBP16.72■□□□□ 0.27
CUEDC1-202ENST00000407144 C22orf34Q6ZV56 151 aa16.72■□□□□ 0.27
CUEDC1-202ENST00000407144 CLPSL1A2RUU4 121 aa16.72■□□□□ 0.27
CUEDC1-202ENST00000407144 ZFAND2AQ8N6M9 145 aa16.72■□□□□ 0.27
CUEDC1-202ENST00000407144 TRBV6-5A0A0K0K1A5 114 aa16.71■□□□□ 0.27
CUEDC1-202ENST00000407144 ATOX1O00244 68 aa16.71■□□□□ 0.27
CUEDC1-202ENST00000407144 PEMTQ9UBM1 199 aa16.71■□□□□ 0.27
CUEDC1-202ENST00000407144 BSNQ9UPA5 3926 aa16.71■□□□□ 0.27
CUEDC1-202ENST00000407144 SPRY2O43597 315 aa16.71■□□□□ 0.27
CUEDC1-202ENST00000407144 NDPQ00604 133 aa16.71■□□□□ 0.27
CUEDC1-202ENST00000407144 CACNA1BQ00975 2339 aa16.71■□□□□ 0.27
CUEDC1-202ENST00000407144 OVOL1O14753 267 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms