RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATP7BP35670 1465 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 TRAV14DV4A0A0A6YYC5 116 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 A0A0G2JND7 137 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL16O15467 120 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 C3orf79P0CE67 100 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL3P10147 92 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL5P13501 91 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 DSCR4P56555 118 aaPredicted RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL8P80075 99 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 DEFB134Q4QY38 66 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 RPL7L1Q6DKI1 246 aaKnown RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 NOXRED1Q6NXP6 359 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 LYPD5Q6UWN5 251 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 DEFB107AQ8IZN7 70 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 SERP2Q8N6R1 65 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 MANBALQ9NQG1 85 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 SIPA1L3O60292 1781 aaPredicted RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 RGPD2P0DJD1 1756 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 UBR1Q8IWV7 1749 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 MAP3K4Q9Y6R4 1608 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 PTPRMP28827 1452 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 TRPM6Q9BX84 2022 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C19orf71A6NCJ1 209 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C17orf51A8MQB3 221 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C17orf98A8MV24 154 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 ZNF736B4DX44 427 aaPredicted RBP2.53□□□□□ -2
HMGB1P13-201ENST00000406019 E7EQL1 145 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C3orf84H3BNL1 204 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 PSCAO43653 123 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 LY6HO94772 140 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 DYNLT1P63172 113 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 FAM229BQ4G0N7 80 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 CCL4L1Q8NHW4 92 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 NXT2Q9NPJ8 142 aaKnown RBP2.53□□□□□ -2
HMGB1P13-201ENST00000406019 OSTCQ9NRP0 149 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 LY96Q9Y6Y9 160 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 LAMB1P07942 1786 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 CRYBG1Q9Y4K1 1723 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 A0A1W2PNN7 141 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 PIRTP0C851 137 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 SMIM13P0DJ93 91 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 RHOHQ15669 191 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 COMMD6Q7Z4G1 85 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 FAM216BQ8N7L0 139 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 SPTSSAQ969W0 71 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 TVP23CQ96ET8 276 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 SLC50A1Q9BRV3 221 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 HIGD2AQ9BW72 106 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 ADCY10Q96PN6 1610 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 EML6Q6ZMW3 1958 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZMYM4Q5VZL5 1548 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZNF407Q9C0G0 2248 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 NUP188Q5SRE5 1749 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 PHRF1Q9P1Y6 1649 aaKnown RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 SNRPGP15A8MWD9 76 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 ATP5EP56381 51 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 UBE2G1P62253 170 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 MIR17HGQ75NE6 70 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 LINC00304Q8N9R0 145 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 LINC01600Q96MT4 127 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 CST11Q9H112 138 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 TAS2R4Q9NYW5 299 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 NWD1Q149M9 1564 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 CDC42BPGQ6DT37 1551 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 NKTRP30414 1462 aaKnown RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 ARHGEF28Q8N1W1 1705 aaKnown RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 MYOM1P52179 1685 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 SNRNP200O75643 2136 aaKnown RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 NUP98P52948 1817 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 A0A1W2PNM2 257 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 H7BZZ5 65 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 PRB4P10163 310 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 COX8AP10176 69 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 PEBP1P30086 187 aaKnown RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 SNRPFP62306 86 aaKnown RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZNF117Q03924 483 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 FAM223AQ8IWN6 122 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 FAM19A2Q8N3H0 131 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 MGST2Q99735 147 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 BPESC1Q9GZL8 116 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 SCN9AQ15858 1988 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 ANAPC1Q9H1A4 1944 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 BTAF1O14981 1849 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 AGLP35573 1532 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGKV2D-26A0A0A0MRZ7 120 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGHV3-73A0A0B4J1V6 119 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 CRYM-AS1A6NIL9 109 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 F2Z2F3 143 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 J3QLW9 94 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGKV1-17P01599 117 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGLV6-57P01721 117 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 CKS2P33552 79 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 SUPT4H1P63272 117 aaKnown RBP2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 Q1T7F1 81 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZCCHC23Q6ZST2 131 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 Q8IYB0 196 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 TRGV9Q99603 122 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms