RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SMIM17P0DL12 118 aa18.62■□□□□ 0.57
CPNE1-205ENST00000401607 IGLL1P15814 213 aa18.62■□□□□ 0.57
CPNE1-205ENST00000401607 IGHV3OR16-12A0A075B7B8 117 aa18.61■□□□□ 0.57
CPNE1-205ENST00000401607 RASL10AQ92737 203 aa18.61■□□□□ 0.57
CPNE1-205ENST00000401607 VWFP04275 2813 aa18.61■□□□□ 0.57
CPNE1-205ENST00000401607 PRSS47A8MTI9 375 aa18.6■□□□□ 0.57
CPNE1-205ENST00000401607 AZU1P20160 251 aa18.6■□□□□ 0.57
CPNE1-205ENST00000401607 MORN3Q6PF18 240 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-205ENST00000401607 CRYGDP07320 174 aa18.6■□□□□ 0.57
CPNE1-205ENST00000401607 IGLV2-18A0A075B6J9 118 aa18.58■□□□□ 0.57
CPNE1-205ENST00000401607 LINC01546A6NGU7 62 aa18.58■□□□□ 0.57
CPNE1-205ENST00000401607 M0R2P5 195 aa18.58■□□□□ 0.57
CPNE1-205ENST00000401607 WIPF1O43516 503 aa18.58■□□□□ 0.57
CPNE1-205ENST00000401607 KRTDAPP60985 99 aa18.58■□□□□ 0.57
CPNE1-205ENST00000401607 CSNK1G2-AS1Q8NCQ2 148 aa18.58■□□□□ 0.57
CPNE1-205ENST00000401607 RPL39LQ96EH5 51 aaKnown RBP18.58■□□□□ 0.57
CPNE1-205ENST00000401607 A0A096LNJ9 63 aa18.58■□□□□ 0.56
CPNE1-205ENST00000401607 C3orf79P0CE67 100 aa18.58■□□□□ 0.56
CPNE1-205ENST00000401607 C3orf56Q8N813 242 aa18.58■□□□□ 0.56
CPNE1-205ENST00000401607 PTH2Q96A98 100 aa18.58■□□□□ 0.56
CPNE1-205ENST00000401607 NXT2Q9NPJ8 142 aaKnown RBP18.58■□□□□ 0.56
CPNE1-205ENST00000401607 FAM74A4Q5TZK3 123 aa18.57■□□□□ 0.56
CPNE1-205ENST00000401607 SUMO4Q6EEV6 95 aa18.57■□□□□ 0.56
CPNE1-205ENST00000401607 C1QTNF4Q9BXJ3 329 aa18.57■□□□□ 0.56
CPNE1-205ENST00000401607 SCGB1D1O95968 90 aa18.56■□□□□ 0.56
CPNE1-205ENST00000401607 LINC00173Q6ZV60 143 aa18.56■□□□□ 0.56
CPNE1-205ENST00000401607 Q8N8P6 123 aa18.56■□□□□ 0.56
CPNE1-205ENST00000401607 GOLT1BQ9Y3E0 138 aa18.56■□□□□ 0.56
CPNE1-205ENST00000401607 IL17DQ8TAD2 202 aa18.55■□□□□ 0.56
CPNE1-205ENST00000401607 RNASE8Q8TDE3 154 aaKnown RBP18.55■□□□□ 0.56
CPNE1-205ENST00000401607 SPXQ9BT56 116 aa18.55■□□□□ 0.56
CPNE1-205ENST00000401607 FBN1P35555 2871 aaKnown RBP18.55■□□□□ 0.56
CPNE1-205ENST00000401607 LEPROTL1O95214 131 aa18.55■□□□□ 0.56
CPNE1-205ENST00000401607 PIK3CD-AS1Q5SR53 167 aa18.55■□□□□ 0.56
CPNE1-205ENST00000401607 SHISA2Q6UWI4 295 aa18.55■□□□□ 0.56
CPNE1-205ENST00000401607 Q8N976 141 aa18.55■□□□□ 0.56
CPNE1-205ENST00000401607 C12orf54Q6X4T0 127 aa18.53■□□□□ 0.56
CPNE1-205ENST00000401607 C20orf78Q9BR46 151 aa18.53■□□□□ 0.56
CPNE1-205ENST00000401607 F5H697 171 aa18.53■□□□□ 0.56
CPNE1-205ENST00000401607 SUMO2P61956 95 aaKnown RBP18.53■□□□□ 0.56
CPNE1-205ENST00000401607 ZNF705AQ6ZN79 300 aaPredicted RBP18.52■□□□□ 0.55
CPNE1-205ENST00000401607 TMEM263Q8WUH6 116 aaKnown RBP18.52■□□□□ 0.55
CPNE1-205ENST00000401607 TMEM158Q8WZ71 300 aa18.52■□□□□ 0.55
CPNE1-205ENST00000401607 SMIM2Q9BVW6 85 aa18.52■□□□□ 0.55
CPNE1-205ENST00000401607 MRPL16Q9NX20 251 aaKnown RBP18.52■□□□□ 0.55
CPNE1-205ENST00000401607 ZNF56Q15929 161 aa18.51■□□□□ 0.55
CPNE1-205ENST00000401607 CSTL1Q9H114 145 aa18.51■□□□□ 0.55
CPNE1-205ENST00000401607 PPP1R17O96001 155 aa18.5■□□□□ 0.55
CPNE1-205ENST00000401607 TRRAPQ9Y4A5 3859 aa18.5■□□□□ 0.55
CPNE1-205ENST00000401607 A8MWV9 139 aa18.5■□□□□ 0.55
CPNE1-205ENST00000401607 HBDP02042 147 aa18.5■□□□□ 0.55
CPNE1-205ENST00000401607 UFSP1Q6NVU6 142 aa18.5■□□□□ 0.55
CPNE1-205ENST00000401607 BTF3P20290 206 aaKnown RBP18.49■□□□□ 0.55
CPNE1-205ENST00000401607 M0QY20 66 aa18.48■□□□□ 0.55
CPNE1-205ENST00000401607 HSPB8Q9UJY1 196 aa18.48■□□□□ 0.55
CPNE1-205ENST00000401607 CFAP126Q5VTH2 177 aa18.47■□□□□ 0.55
CPNE1-205ENST00000401607 NOTCH3Q9UM47 2321 aa18.47■□□□□ 0.55
CPNE1-205ENST00000401607 TCAPO15273 167 aa18.47■□□□□ 0.55
CPNE1-205ENST00000401607 SPATA12Q7Z6I5 190 aa18.47■□□□□ 0.55
CPNE1-205ENST00000401607 TMEM70Q9BUB7 260 aa18.47■□□□□ 0.55
CPNE1-205ENST00000401607 PLAC8L1A1L4L8 177 aa18.46■□□□□ 0.55
CPNE1-205ENST00000401607 IGHV3-73A0A0B4J1V6 119 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 FCER1GP30273 86 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 C16orf74Q96GX8 76 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 NDUFAF3Q9BU61 184 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 ST20Q9HBF5 79 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 TRBV6-5A0A0K0K1A5 114 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 PCP4L1A6NKN8 68 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 SYS1-DBNDD2H3BUS1 97 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 RS1O15537 224 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 LAGE3Q14657 143 aa18.45■□□□□ 0.54
CPNE1-205ENST00000401607 RPL32P62910 135 aaKnown RBP18.44■□□□□ 0.54
CPNE1-205ENST00000401607 TEX43Q6ZNM6 134 aa18.44■□□□□ 0.54
CPNE1-205ENST00000401607 EDA2RQ9HAV5 297 aa18.44■□□□□ 0.54
CPNE1-205ENST00000401607 NACAE9PAV3 2078 aa18.44■□□□□ 0.54
CPNE1-205ENST00000401607 POLR2KP53803 58 aaKnown RBP18.43■□□□□ 0.54
CPNE1-205ENST00000401607 RRN3P1Q2M238 152 aa18.43■□□□□ 0.54
CPNE1-205ENST00000401607 OXLD1Q5BKU9 147 aa18.43■□□□□ 0.54
CPNE1-205ENST00000401607 MAP1LC3CQ9BXW4 147 aa18.43■□□□□ 0.54
CPNE1-205ENST00000401607 TRGV1A0A0A0MS02 117 aa18.42■□□□□ 0.54
CPNE1-205ENST00000401607 S100A12P80511 92 aa18.42■□□□□ 0.54
CPNE1-205ENST00000401607 DAZ2Q13117 558 aaKnown RBP18.42■□□□□ 0.54
CPNE1-205ENST00000401607 NEGR1Q7Z3B1 354 aa18.42■□□□□ 0.54
CPNE1-205ENST00000401607 Q6ZTI0 123 aa18.41■□□□□ 0.54
CPNE1-205ENST00000401607 NOP10Q9NPE3 64 aaKnown RBP18.41■□□□□ 0.54
CPNE1-205ENST00000401607 RHODO00212 210 aa18.4■□□□□ 0.54
CPNE1-205ENST00000401607 SDHAF1A6NFY7 115 aa18.4■□□□□ 0.54
CPNE1-205ENST00000401607 K7EMI3 77 aa18.4■□□□□ 0.54
CPNE1-205ENST00000401607 LGALS9BQ3B8N2 356 aa18.4■□□□□ 0.54
CPNE1-205ENST00000401607 Q6ZSN1 163 aa18.4■□□□□ 0.54
CPNE1-205ENST00000401607 KIR2DL5BA0A0G2JN68 375 aa18.39■□□□□ 0.53
CPNE1-205ENST00000401607 KIR2DL5BA0A0G2JPC4 375 aa18.39■□□□□ 0.53
CPNE1-205ENST00000401607 KIR2DL5AQ8N109 375 aa18.39■□□□□ 0.53
CPNE1-205ENST00000401607 ZNF664Q8N3J9 261 aa18.39■□□□□ 0.53
CPNE1-205ENST00000401607 KIR2DL5BQ8NHK3 375 aa18.39■□□□□ 0.53
CPNE1-205ENST00000401607 ORMDL2Q53FV1 153 aa18.38■□□□□ 0.53
CPNE1-205ENST00000401607 PET117Q6UWS5 81 aa18.38■□□□□ 0.53
CPNE1-205ENST00000401607 H7C1H1 209 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 OVOL2Q9BRP0 275 aa18.37■□□□□ 0.53
CPNE1-205ENST00000401607 TRBV27A0A0K0K1C4 114 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms