RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 DEFB125Q8N687 156 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 ATP6V0E2Q8NHE4 81 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 C4orf3Q8WVX3 66 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 ZMAT4Q9H898 229 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 EDA2RQ9HAV5 297 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 GYPEP15421 78 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 C22orf34Q6ZV56 151 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 ATP5G1P05496 136 aa11.74□□□□□ -0.53
ABCC1-201ENST00000399408 UBL5Q9BZL1 73 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 PTPRQQ9UMZ3 2332 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 FREM1Q5H8C1 2179 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 KIAA1549LQ6ZVL6 1849 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 IGKV2D-24A0A075B6R9 120 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 DEFB1P60022 68 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 C5orf38Q86SI9 138 aa11.73□□□□□ -0.53
ABCC1-201ENST00000399408 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
ABCC1-201ENST00000399408 MYCNOSP40205 109 aa11.72□□□□□ -0.53
ABCC1-201ENST00000399408 SPART-AS1P0CW21 52 aa11.72□□□□□ -0.53
ABCC1-201ENST00000399408 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
ABCC1-201ENST00000399408 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
ABCC1-201ENST00000399408 CCDC140Q96MF4 163 aa11.72□□□□□ -0.53
ABCC1-201ENST00000399408 FRMD6-AS1P0C7T7 363 aa11.72□□□□□ -0.53
ABCC1-201ENST00000399408 DENND4AQ7Z401 1863 aa11.72□□□□□ -0.53
ABCC1-201ENST00000399408 TDRG1Q3Y452 100 aa11.72□□□□□ -0.53
ABCC1-201ENST00000399408 FSTL3O95633 263 aa11.71□□□□□ -0.53
ABCC1-201ENST00000399408 IFITM1P13164 125 aa11.71□□□□□ -0.53
ABCC1-201ENST00000399408 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.53
ABCC1-201ENST00000399408 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
ABCC1-201ENST00000399408 PRORYQ9H606 182 aa11.71□□□□□ -0.53
ABCC1-201ENST00000399408 RPL32P62910 135 aaKnown RBP11.71□□□□□ -0.54
ABCC1-201ENST00000399408 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.54
ABCC1-201ENST00000399408 TOMM6Q96B49 74 aa11.71□□□□□ -0.54
ABCC1-201ENST00000399408 PLCE1Q9P212 2302 aa11.71□□□□□ -0.54
ABCC1-201ENST00000399408 A0A0J9YX75 114 aa11.7□□□□□ -0.54
ABCC1-201ENST00000399408 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
ABCC1-201ENST00000399408 LOXL1Q08397 574 aaPredicted RBP11.7□□□□□ -0.54
ABCC1-201ENST00000399408 SH2D6Q7Z4S9 175 aa11.7□□□□□ -0.54
ABCC1-201ENST00000399408 C19orf84I3L1E1 186 aa11.7□□□□□ -0.54
ABCC1-201ENST00000399408 TIMM17AQ99595 171 aa11.7□□□□□ -0.54
ABCC1-201ENST00000399408 Q6ZVH6 145 aa11.7□□□□□ -0.54
ABCC1-201ENST00000399408 CCL25O15444 150 aa11.69□□□□□ -0.54
ABCC1-201ENST00000399408 NTN5Q8WTR8 489 aaPredicted RBP11.69□□□□□ -0.54
ABCC1-201ENST00000399408 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
ABCC1-201ENST00000399408 NCOA6Q14686 2063 aaPredicted RBP11.69□□□□□ -0.54
ABCC1-201ENST00000399408 MRAPQ8TCY5 172 aa11.69□□□□□ -0.54
ABCC1-201ENST00000399408 C1orf43Q9BWL3 253 aa11.69□□□□□ -0.54
ABCC1-201ENST00000399408 SPG11Q96JI7 2443 aa11.69□□□□□ -0.54
ABCC1-201ENST00000399408 TRBV7-3A0A075B6L6 115 aa11.69□□□□□ -0.54
ABCC1-201ENST00000399408 DSCR8Q96T75 97 aa11.69□□□□□ -0.54
ABCC1-201ENST00000399408 IGLL5B9A064 214 aa11.68□□□□□ -0.54
ABCC1-201ENST00000399408 HAMPP81172 84 aa11.68□□□□□ -0.54
ABCC1-201ENST00000399408 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
ABCC1-201ENST00000399408 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
ABCC1-201ENST00000399408 CUL9Q8IWT3 2517 aa11.68□□□□□ -0.54
ABCC1-201ENST00000399408 LINC01548A6NM66 108 aa11.68□□□□□ -0.54
ABCC1-201ENST00000399408 TRAV4A0A0B4J268 109 aa11.68□□□□□ -0.54
ABCC1-201ENST00000399408 RBMY1FQ15415 496 aaKnown RBP11.68□□□□□ -0.54
ABCC1-201ENST00000399408 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
ABCC1-201ENST00000399408 CITED2Q99967 270 aaPredicted RBP11.67□□□□□ -0.54
ABCC1-201ENST00000399408 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
ABCC1-201ENST00000399408 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
ABCC1-201ENST00000399408 IGHG4P01861 327 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 Q9HAA7 133 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 SPANXDQ9BXN6 97 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 A0A1B0GXF2 115 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 HIGD1BQ9P298 99 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 IGF1P05019 195 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 COX7A2LO14548 114 aa11.66□□□□□ -0.54
ABCC1-201ENST00000399408 PLA2G5P39877 138 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 C10orf142B7Z368 130 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 ZNF80P51504 273 aaPredicted RBP11.65□□□□□ -0.54
ABCC1-201ENST00000399408 COX7B2Q8TF08 81 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 A4D1N5 150 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 CRYGBP07316 175 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 LRRC75A-AS1Q8N1F1 130 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 TTTY13Q9BZ97 58 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 C9orf153Q5TBE3 101 aa11.65□□□□□ -0.54
ABCC1-201ENST00000399408 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.55
ABCC1-201ENST00000399408 DNAJC9-AS1A6NH13 148 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 BAALC-AS2P0C853 105 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 ORMDL1Q9P0S3 153 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 E9PLD3 99 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 LINC00322Q6ZN03 302 aaPredicted RBP11.64□□□□□ -0.55
ABCC1-201ENST00000399408 CAMK2N2Q96S95 79 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 PCDH15Q96QU1 1955 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 ESM1Q9NQ30 184 aa11.64□□□□□ -0.55
ABCC1-201ENST00000399408 ODF1Q14990 250 aa11.63□□□□□ -0.55
ABCC1-201ENST00000399408 DYSFO75923 2080 aa11.63□□□□□ -0.55
ABCC1-201ENST00000399408 MUC22E2RYF6 1773 aaPredicted RBP11.63□□□□□ -0.55
ABCC1-201ENST00000399408 EBI3Q14213 229 aa11.63□□□□□ -0.55
ABCC1-201ENST00000399408 NOTCH2Q04721 2471 aa11.63□□□□□ -0.55
ABCC1-201ENST00000399408 C11orf86A6NJI1 115 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms