RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CLLU1Q5K131 121 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 ZFP2Q6ZN57 461 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 NIT1Q86X76 327 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 HSD17B11Q8NBQ5 300 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 OR10G9Q8NGN4 311 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 THAP6Q8TBB0 222 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 ANAPC16Q96DE5 110 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 TVP23CQ96ET8 276 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 DNAJC30Q96LL9 226 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 URGCP-MRPS24S4R325 110 aa6.06□□□□□ -1.44
NEDD9-203ENST00000397378 GAGE12JA6NER3 117 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 F6UZH7 168 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 S100A10P60903 97 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 RBX1P62877 108 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 BLOC1S1P78537 153 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 GAGE4Q13068 117 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 GAGE5Q13069 117 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 RAB32Q13637 225 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 GAGE13Q4V321 117 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 PIK3CD-AS1Q5SR53 167 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 TRIQKQ629K1 86 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 TCTE3Q8IZS6 198 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 CMTM2Q8TAZ6 248 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 C14orf144Q96I85 54 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 HYLS1Q96M11 299 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 CHCHD7Q9BUK0 85 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 OTORQ9NRC9 128 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
NEDD9-203ENST00000397378 A4D1N5 150 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 PGPA6NDG6 321 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 FGF8P55075 233 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-203ENST00000397378 DEFA1P59665 94 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 DEFA3P59666 94 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 Q0VG73 95 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 ELOBQ15370 118 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 KHDC3LQ587J8 217 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 FAM74A1Q5RGS3 127 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-203ENST00000397378 GOLT1AQ6ZVE7 132 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 OR5C1Q8NGR4 320 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 UBE2WQ96B02 151 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 LINC00479Q96M42 142 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 TPPP3Q9BW30 176 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 NMES1Q9C002 83 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 WDR61Q9GZS3 305 aaKnown RBP6.04□□□□□ -1.44
NEDD9-203ENST00000397378 PARLQ9H300 379 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 C11orf21Q9P2W6 132 aa6.04□□□□□ -1.44
NEDD9-203ENST00000397378 A0A0D9SG52 128 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 A8MWV9 139 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 TAAR5O14804 337 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 DLEU1O43261 78 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 RNASE3P12724 160 aaKnown RBP6.03□□□□□ -1.44
NEDD9-203ENST00000397378 TAS2R45P59539 299 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 DGAT2L7PQ6IED9 249 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 LINC01600Q96MT4 127 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 SDHCQ99643 169 aaPredicted RBP6.03□□□□□ -1.44
NEDD9-203ENST00000397378 Q9UF83 564 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 MUC2Q02817 5179 aa6.03□□□□□ -1.44
NEDD9-203ENST00000397378 A0A087WX48 190 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 C17orf112F2Z3M2 114 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 EIF3GO75821 320 aaKnown RBP eCLIP6.02□□□□□ -1.45
NEDD9-203ENST00000397378 SCO1O75880 301 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 ZNF80P51504 273 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-203ENST00000397378 FFAR4Q5NUL3 377 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 OR2T35Q8NGX2 323 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 NDFIP1Q9BT67 221 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 C1orf43Q9BWL3 253 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 SAMD10Q9BYL1 202 aa6.02□□□□□ -1.45
NEDD9-203ENST00000397378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-203ENST00000397378 IFNA7P01567 189 aa6.01□□□□□ -1.45
NEDD9-203ENST00000397378 UFSP1Q6NVU6 142 aa6.01□□□□□ -1.45
NEDD9-203ENST00000397378 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
NEDD9-203ENST00000397378 TMEM75Q8N9X5 138 aa6.01□□□□□ -1.45
NEDD9-203ENST00000397378 USP17L23D6RBM5 183 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 TSTD3H0UI37 97 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 PANO1I0J062 215 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 GCGP01275 180 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 TCRBP04435 133 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 PRSS1P07477 247 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 PKIAP61925 76 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
NEDD9-203ENST00000397378 LGALSLQ3ZCW2 172 aaPredicted RBP6□□□□□ -1.45
NEDD9-203ENST00000397378 KCNIP4Q6PIL6 250 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 ENHOQ6UWT2 76 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 PQLC2Q6ZP29 291 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 SDIM1Q6ZPB5 146 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 COMMD7Q86VX2 200 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 OR10G7Q8NGN6 311 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 PACRGQ96M98 296 aaPredicted RBP6□□□□□ -1.45
NEDD9-203ENST00000397378 OR5AC2Q9NZP5 309 aa6□□□□□ -1.45
NEDD9-203ENST00000397378 RHODO00212 210 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 PLA2G10O15496 165 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 UPK1BO75841 260 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 SCGB1A1P11684 91 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 UBE2G2P60604 165 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 RAB2AP61019 212 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 GNG5P63218 68 aa5.99□□□□□ -1.45
NEDD9-203ENST00000397378 RPL19P84098 196 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms