RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 KCNIP4Q6PIL6 250 aa11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 SLC51BQ86UW2 128 aa11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 Q8N3U1 123 aa11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 CIRBP-AS1Q8TBR5 109 aa11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
EXOSC3-202ENST00000396521 CTXND1A0A1B0GTU2 59 aa11.46□□□□□ -0.57
EXOSC3-202ENST00000396521 ARL14EPLP0DKL9 152 aa11.46□□□□□ -0.57
EXOSC3-202ENST00000396521 Q0VG73 95 aa11.46□□□□□ -0.57
EXOSC3-202ENST00000396521 NIT1Q86X76 327 aa11.46□□□□□ -0.57
EXOSC3-202ENST00000396521 TMEM75Q8N9X5 138 aa11.46□□□□□ -0.57
EXOSC3-202ENST00000396521 SUN5Q8TC36 379 aa11.46□□□□□ -0.57
EXOSC3-202ENST00000396521 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
EXOSC3-202ENST00000396521 A0A087WX48 190 aa11.45□□□□□ -0.58
EXOSC3-202ENST00000396521 UMAD1C9J7I0 102 aa11.45□□□□□ -0.58
EXOSC3-202ENST00000396521 IGLV2-11P01706 119 aa11.45□□□□□ -0.58
EXOSC3-202ENST00000396521 ATRAIDQ6UW56 229 aa11.45□□□□□ -0.58
EXOSC3-202ENST00000396521 SGK494Q96LW2 274 aa11.45□□□□□ -0.58
EXOSC3-202ENST00000396521 IL36BQ9NZH7 164 aa11.45□□□□□ -0.58
EXOSC3-202ENST00000396521 EPDR1Q9UM22 224 aa11.45□□□□□ -0.58
EXOSC3-202ENST00000396521 FABP5P3A8MUU1 101 aa11.44□□□□□ -0.58
EXOSC3-202ENST00000396521 STAG3L2P0CL84 134 aa11.44□□□□□ -0.58
EXOSC3-202ENST00000396521 STAG3L3P0CL85 134 aa11.44□□□□□ -0.58
EXOSC3-202ENST00000396521 ASIPP42127 132 aa11.44□□□□□ -0.58
EXOSC3-202ENST00000396521 LINC01620Q4KN68 170 aa11.44□□□□□ -0.58
EXOSC3-202ENST00000396521 FAM213BQ8TBF2 198 aa11.44□□□□□ -0.58
EXOSC3-202ENST00000396521 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
EXOSC3-202ENST00000396521 LRP1Q07954 4544 aaKnown RBP11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 MAP1LC3B2A6NCE7 125 aa11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 CXorf1O96002 111 aa11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 SUMO1P63165 101 aaKnown RBP11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 UFSP1Q6NVU6 142 aa11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 PRNTQ86SH4 94 aa11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 MAP1LC3BQ9GZQ8 125 aa11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 KLK12Q9UKR0 248 aa11.43□□□□□ -0.58
EXOSC3-202ENST00000396521 GCHFRP30047 84 aa11.42□□□□□ -0.58
EXOSC3-202ENST00000396521 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
EXOSC3-202ENST00000396521 HMCN2Q8NDA2 5059 aa11.42□□□□□ -0.58
EXOSC3-202ENST00000396521 IGKV3D-20A0A0C4DH25 116 aa11.41□□□□□ -0.58
EXOSC3-202ENST00000396521 TRBV10-1A0A0K0K1A3 114 aa11.41□□□□□ -0.58
EXOSC3-202ENST00000396521 ZNF726P1Q15940 193 aa11.41□□□□□ -0.58
EXOSC3-202ENST00000396521 DNLZQ5SXM8 178 aa11.41□□□□□ -0.58
EXOSC3-202ENST00000396521 SAMD10Q9BYL1 202 aa11.41□□□□□ -0.58
EXOSC3-202ENST00000396521 FHITP49789 147 aa11.4□□□□□ -0.58
EXOSC3-202ENST00000396521 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.58
EXOSC3-202ENST00000396521 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
EXOSC3-202ENST00000396521 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.58
EXOSC3-202ENST00000396521 A0A1W2PRE2 83 aa11.39□□□□□ -0.59
EXOSC3-202ENST00000396521 RAB5CP51148 216 aa11.39□□□□□ -0.59
EXOSC3-202ENST00000396521 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
EXOSC3-202ENST00000396521 A0A1B0GV50 99 aa11.38□□□□□ -0.59
EXOSC3-202ENST00000396521 PKIAP61925 76 aa11.38□□□□□ -0.59
EXOSC3-202ENST00000396521 RPL36AP83881 106 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-202ENST00000396521 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
EXOSC3-202ENST00000396521 RPL36ALQ969Q0 106 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-202ENST00000396521 NKX6-2Q9C056 277 aaPredicted RBP11.38□□□□□ -0.59
EXOSC3-202ENST00000396521 Q9UF83 564 aa11.38□□□□□ -0.59
EXOSC3-202ENST00000396521 B4DEV8 164 aa11.37□□□□□ -0.59
EXOSC3-202ENST00000396521 H2AFB1P0C5Y9 115 aa11.37□□□□□ -0.59
EXOSC3-202ENST00000396521 SFT2D1Q8WV19 159 aa11.37□□□□□ -0.59
EXOSC3-202ENST00000396521 JPT2Q9H910 190 aa11.37□□□□□ -0.59
EXOSC3-202ENST00000396521 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 TEX46H3BTG2 121 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 SULT1A2P50226 295 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 UBE2G2P60604 165 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 ALKAL2Q6UX46 152 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 SFRP2Q96HF1 295 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 PHLDA3Q9Y5J5 127 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 ARL2-SNX15V9GYD0 113 aa11.36□□□□□ -0.59
EXOSC3-202ENST00000396521 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
EXOSC3-202ENST00000396521 H3BVH4 76 aa11.35□□□□□ -0.59
EXOSC3-202ENST00000396521 CRPP02741 224 aa11.35□□□□□ -0.59
EXOSC3-202ENST00000396521 FAM74A4Q5TZK3 123 aa11.35□□□□□ -0.59
EXOSC3-202ENST00000396521 COX8CQ7Z4L0 72 aa11.35□□□□□ -0.59
EXOSC3-202ENST00000396521 HIST1H2BAQ96A08 127 aa11.35□□□□□ -0.59
EXOSC3-202ENST00000396521 ZFP30Q9Y2G7 519 aa11.35□□□□□ -0.59
EXOSC3-202ENST00000396521 KRBOX1C9JBD0 128 aa11.34□□□□□ -0.59
EXOSC3-202ENST00000396521 IFNA7P01567 189 aa11.34□□□□□ -0.59
EXOSC3-202ENST00000396521 UBE2D3P61077 147 aa11.34□□□□□ -0.59
EXOSC3-202ENST00000396521 UBE2D2P62837 147 aa11.34□□□□□ -0.59
EXOSC3-202ENST00000396521 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
EXOSC3-202ENST00000396521 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
EXOSC3-202ENST00000396521 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
EXOSC3-202ENST00000396521 MIAQ16674 131 aa11.33□□□□□ -0.6
EXOSC3-202ENST00000396521 ZFP82Q8N141 532 aa11.33□□□□□ -0.6
EXOSC3-202ENST00000396521 OR10G8Q8NGN5 311 aa11.33□□□□□ -0.6
EXOSC3-202ENST00000396521 FAT3Q8TDW7 4589 aa11.33□□□□□ -0.6
EXOSC3-202ENST00000396521 UBR4Q5T4S7 5183 aa11.33□□□□□ -0.6
EXOSC3-202ENST00000396521 TRAV34A0A0B4J273 112 aa11.32□□□□□ -0.6
EXOSC3-202ENST00000396521 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
EXOSC3-202ENST00000396521 CST9LP1Q5W188 147 aa11.32□□□□□ -0.6
EXOSC3-202ENST00000396521 C9orf163Q8N9P6 203 aa11.32□□□□□ -0.6
EXOSC3-202ENST00000396521 A0A087WWL8 130 aa11.31□□□□□ -0.6
EXOSC3-202ENST00000396521 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
EXOSC3-202ENST00000396521 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
EXOSC3-202ENST00000396521 ENHOQ6UWT2 76 aa11.31□□□□□ -0.6
EXOSC3-202ENST00000396521 Q6ZRU5 148 aa11.31□□□□□ -0.6
EXOSC3-202ENST00000396521 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms