RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 LINC00269Q8N2A0 174 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 VSTM2AQ8TAG5 236 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 VAMP8Q9BV40 100 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 TMEM242Q9NWH2 141 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 R4GN34 69 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 PLXNA3P51805 1871 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 ZSWIM8A7E2V4 1837 aa2.96□□□□□ -1.94
GABPB1-204ENST00000396464 FAM24AA6NFZ4 105 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 C5orf67F2Z3F1 127 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 J3QLW9 94 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 MT-ATP8P03928 68 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 IGLC1P0CG04 106 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 OR8B3Q8NGG8 313 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 SPTSSAQ969W0 71 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 SMIM7Q9BQ49 75 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 LINC00312Q9Y6C7 94 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 LRRC37A2A6NM11 1700 aa2.95□□□□□ -1.94
GABPB1-204ENST00000396464 ZNF236Q9UL36 1845 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 NDUFB6O95139 128 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 IGKV3-15P01624 115 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 LINC00032P0C843 101 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 DSCR10P59022 87 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 SPANXN5Q5MJ07 72 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 LCN9Q8WX39 176 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 CASP8AP2Q9UKL3 1982 aa2.94□□□□□ -1.94
GABPB1-204ENST00000396464 SNCGO76070 127 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 BAALC-AS2P0C853 105 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 ZNF791Q3KP31 576 aaPredicted RBP2.93□□□□□ -1.94
GABPB1-204ENST00000396464 SLC25A26Q70HW3 274 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 MUCL1Q96DR8 90 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 HIGD2AQ9BW72 106 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 DPH3P1Q9H4G8 78 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 TMEM106BQ9NUM4 274 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 AP4S1Q9Y587 144 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 BAZ2BQ9UIF8 2168 aaKnown RBP2.93□□□□□ -1.94
GABPB1-204ENST00000396464 IGLV2-18A0A075B6J9 118 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 HMSDA8MTL9 139 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 E7EUB6 86 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 PROSCO94903 275 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 PIRTP0C851 137 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 DSCR4P56555 118 aaPredicted RBP2.93□□□□□ -1.94
GABPB1-204ENST00000396464 ARPINQ7Z6K5 226 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 ATG5Q9H1Y0 275 aa2.93□□□□□ -1.94
GABPB1-204ENST00000396464 CCDC88CQ9P219 2028 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 MCM3APO60318 1980 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 KIAA1549Q9HCM3 1950 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 CPAMD8Q8IZJ3 1885 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 IGLV10-54A0A075B6I4 117 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 A0A087WSZ3 146 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 TMSB15BA0A087X1C1 80 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 RBAKDNA6NC62 111 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 ODF3BA8MYP8 253 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 IBA57-AS1B1ANH7 110 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 PSCAO43653 123 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 UBL3O95164 117 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 IL7P13232 177 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 MIFP14174 115 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 SSR2P43308 183 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 Q8N8P6 123 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 TSKUQ8WUA8 353 aa2.92□□□□□ -1.94
GABPB1-204ENST00000396464 PRR14LQ5THK1 2151 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 TCHHQ07283 1943 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 IGKV3D-11A0A0A0MRZ8 115 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 TRAV14DV4A0A0A6YYC5 116 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 ASAH2BP0C7U1 165 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 COX7CP15954 63 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 SNCAP37840 140 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 INSL4Q14641 139 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 DEFB113Q30KQ7 82 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 SPINK14Q6IE38 97 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 SBSPONQ8IVN8 264 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 C9orf163Q8N9P6 203 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
GABPB1-204ENST00000396464 P0C880 135 aa2.9□□□□□ -1.95
GABPB1-204ENST00000396464 PIPP12273 146 aaPredicted RBP2.9□□□□□ -1.95
GABPB1-204ENST00000396464 DCDP81605 110 aaKnown RBP2.9□□□□□ -1.95
GABPB1-204ENST00000396464 C12orf73Q69YU5 71 aa2.9□□□□□ -1.95
GABPB1-204ENST00000396464 DYNLRB2Q8TF09 96 aa2.9□□□□□ -1.95
GABPB1-204ENST00000396464 NPVFQ9HCQ7 196 aa2.9□□□□□ -1.95
GABPB1-204ENST00000396464 LHFPL6Q9Y693 200 aa2.9□□□□□ -1.95
GABPB1-204ENST00000396464 SCN3AQ9NY46 2000 aa2.9□□□□□ -1.95
GABPB1-204ENST00000396464 PCNTO95613 3336 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 CEP350Q5VT06 3117 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 ADCYAP1P18509 176 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 ERHP84090 104 aaKnown RBP2.89□□□□□ -1.95
GABPB1-204ENST00000396464 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 Q0VG73 95 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 MYO9BQ13459 2157 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 S100A7L2Q5SY68 101 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 CASC2Q6XLA1 102 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 HMGN2P46Q86SG4 172 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 TMEM254Q8TBM7 123 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 BET1LQ9NYM9 111 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 NDUFA12Q9UI09 145 aa2.89□□□□□ -1.95
GABPB1-204ENST00000396464 DIDO1Q9BTC0 2240 aaKnown RBP2.89□□□□□ -1.95
GABPB1-204ENST00000396464 IGLV3-16A0A075B6K0 115 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 TRAV10A0A0B4J240 114 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 TRAV40A0A0B4J280 105 aa2.88□□□□□ -1.95
GABPB1-204ENST00000396464 TCRBV4S1A1TA0A5B7 111 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms