RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 ZCCHC24Q8N2G6 241 aaKnown RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 C17orf77Q96MU5 243 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 C16orf97H3BN30 126 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 SAA2P0DJI9 122 aaPredicted RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 COX7A1P24310 79 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 HOXD3P31249 432 aaPredicted RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 C2orf66Q6UXQ4 117 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 BAALCQ8WXS3 180 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 CCL13Q99616 98 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 TMEM133Q9H2Q1 129 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 IGKV1OR2-108A0A075B7D4 117 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 IGKV1-16P04430 117 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 SLC25A15Q9Y619 301 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 TET2Q6N021 2002 aaPredicted RBP6.58□□□□□ -1.36
NDE1-202ENST00000396355 SVEP1Q4LDE5 3571 aa6.58□□□□□ -1.36
NDE1-202ENST00000396355 NDUFC2O95298 119 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 IGHG4P01861 327 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 IGHV1-2P23083 117 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 LOXP28300 417 aaPredicted RBP6.57□□□□□ -1.36
NDE1-202ENST00000396355 EIF4EBP1Q13541 118 aaPredicted RBP6.57□□□□□ -1.36
NDE1-202ENST00000396355 MUSTN1Q8IVN3 82 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 C14orf178Q8N769 122 aaPredicted RBP6.57□□□□□ -1.36
NDE1-202ENST00000396355 C11orf68Q9H3H3 251 aaKnown RBP6.57□□□□□ -1.36
NDE1-202ENST00000396355 M0R1W7 72 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 TACC2O95359 2948 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 IGFL3Q6UXB1 125 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 RASL10AQ92737 203 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 FXYD5Q96DB9 178 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 C16orf92Q96LL3 132 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 MAP1AP78559 2803 aaPredicted RBP6.57□□□□□ -1.36
NDE1-202ENST00000396355 TRBV19A0A075B6N1 114 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 INS-IGF2F8WCM5 200 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 P0C879 139 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 C11orf53Q8IXP5 236 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 SIGLEC9Q9Y336 463 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 TRAV23DV6A0A075B6W5 121 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 TRBV10-2A0A0K0K1G8 114 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 PRCDQ00LT1 54 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 ORMDL2Q53FV1 153 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 CT83Q5H943 113 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 DTX2Q86UW9 622 aa6.57□□□□□ -1.36
NDE1-202ENST00000396355 COX7CP15954 63 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 WDR31Q8NA23 367 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 PRO0461Q9UI25 63 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 LGALS9O00182 355 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 SIRPDQ9H106 197 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 KNCNA6PVL3 124 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 PPP1R17O96001 155 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 FAM27E3Q08E93 113 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 DAND5Q8N907 189 aa6.56□□□□□ -1.36
NDE1-202ENST00000396355 ITLN2Q8WWU7 325 aaPredicted RBP6.56□□□□□ -1.36
NDE1-202ENST00000396355 IGKV3OR2-268A0A0C4DH90 116 aa6.55□□□□□ -1.36
NDE1-202ENST00000396355 J3QQQ9 107 aa6.55□□□□□ -1.36
NDE1-202ENST00000396355 IQCF6A8MYZ5 107 aa6.55□□□□□ -1.36
NDE1-202ENST00000396355 C9orf106Q8NAJ2 232 aa6.55□□□□□ -1.36
NDE1-202ENST00000396355 SUMO2P61956 95 aaKnown RBP6.55□□□□□ -1.36
NDE1-202ENST00000396355 Q8N7P7 452 aa6.55□□□□□ -1.36
NDE1-202ENST00000396355 Q8N8P6 123 aa6.55□□□□□ -1.36
NDE1-202ENST00000396355 PHLDA1Q8WV24 401 aaPredicted RBP6.55□□□□□ -1.36
NDE1-202ENST00000396355 DCHS2Q6V1P9 2916 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 GAS8-AS1O95177 125 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 BAALC-AS2P0C853 105 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 CFHR4Q92496 578 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 A0A087WVE0 104 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 PROP1O75360 226 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 Q6ZT83 130 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 TP53TG1Q9Y2A0 90 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 DSCAMO60469 2012 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 NDUFB3O43676 98 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 UTF1Q5T230 341 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 SOSTDC1Q6X4U4 206 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
NDE1-202ENST00000396355 FAM167A-AS1Q96KT0 104 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 LINC01587Q99440 93 aa6.54□□□□□ -1.36
NDE1-202ENST00000396355 SHISA9B4DS77 424 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 RNF7Q9UBF6 113 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 IGKV3-20P01619 116 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 HAMPP81172 84 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 PAPPA-AS1Q5QFB9 102 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 LINC00643Q86TS7 51 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 PRSS46E5RG02 174 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 PATE2Q6UY27 113 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 PYGO1Q9Y3Y4 419 aa6.53□□□□□ -1.36
NDE1-202ENST00000396355 A0A0B4J2C4 111 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 GHRHP01286 108 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 EGR2P11161 476 aaPredicted RBP6.52□□□□□ -1.37
NDE1-202ENST00000396355 UBE2E1P51965 193 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 SPRNQ5BIV9 151 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
NDE1-202ENST00000396355 METTL26Q96S19 204 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 TOMM7Q9P0U1 55 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 FAM216BQ8N7L0 139 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms