RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 STOML3Q8TAV4 291 aa10.27□□□□□ -0.77
SNCA-205ENST00000394991 C9orf85Q96MD7 179 aa10.27□□□□□ -0.77
SNCA-205ENST00000394991 Q9UF83 564 aa10.27□□□□□ -0.77
SNCA-205ENST00000394991 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 SEC11BP0C7V7 166 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 EIF5AP63241 154 aaKnown RBP10.26□□□□□ -0.77
SNCA-205ENST00000394991 FLI1Q01543 452 aaPredicted RBP10.26□□□□□ -0.77
SNCA-205ENST00000394991 GAGE1Q13065 139 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 GAGE4Q13068 117 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 GAGE5Q13069 117 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 GAGE13Q4V321 117 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 Q6ZNX1 250 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 FAM213BQ8TBF2 198 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 RMI2Q96E14 147 aa10.26□□□□□ -0.77
SNCA-205ENST00000394991 TRAV34A0A0B4J273 112 aa10.25□□□□□ -0.77
SNCA-205ENST00000394991 A0A1B0GV50 99 aa10.25□□□□□ -0.77
SNCA-205ENST00000394991 FAM74A7A6NL05 159 aa10.25□□□□□ -0.77
SNCA-205ENST00000394991 hCG_2014768A0A024R1R8 64 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 UMAD1C9J7I0 102 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 TPT1P13693 172 aaKnown RBP10.24□□□□□ -0.77
SNCA-205ENST00000394991 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
SNCA-205ENST00000394991 ZFP69Q49AA0 526 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 TMEM75Q8N9X5 138 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 SFT2D1Q8WV19 159 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 PTH2Q96A98 100 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 NKX6-2Q9C056 277 aaPredicted RBP10.24□□□□□ -0.77
SNCA-205ENST00000394991 PARLQ9H300 379 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 TNXBP22105 4242 aa10.24□□□□□ -0.77
SNCA-205ENST00000394991 PEX7O00628 323 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 GCGP01275 180 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 SMUG1Q53HV7 270 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 SAPCD1Q5SSQ6 148 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 CST9LP1Q5W188 147 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 NIT1Q86X76 327 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 TCTE3Q8IZS6 198 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 SAMD10Q9BYL1 202 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
SNCA-205ENST00000394991 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
SNCA-205ENST00000394991 LGALSLQ3ZCW2 172 aaPredicted RBP10.22□□□□□ -0.77
SNCA-205ENST00000394991 HIST1H2BAQ96A08 127 aa10.22□□□□□ -0.77
SNCA-205ENST00000394991 A0A087WWC5 75 aa10.21□□□□□ -0.77
SNCA-205ENST00000394991 PAGE4O60829 102 aa10.21□□□□□ -0.77
SNCA-205ENST00000394991 ATRAIDQ6UW56 229 aa10.21□□□□□ -0.77
SNCA-205ENST00000394991 C14orf178Q8N769 122 aaPredicted RBP10.21□□□□□ -0.77
SNCA-205ENST00000394991 MBD3L1Q8WWY6 194 aa10.21□□□□□ -0.77
SNCA-205ENST00000394991 UBE2WQ96B02 151 aa10.21□□□□□ -0.77
SNCA-205ENST00000394991 ARL2-SNX15V9GYD0 113 aa10.21□□□□□ -0.77
SNCA-205ENST00000394991 RNF213Q63HN8 5207 aa10.21□□□□□ -0.78
SNCA-205ENST00000394991 H2AFB1P0C5Y9 115 aa10.2□□□□□ -0.78
SNCA-205ENST00000394991 UBE2G1P62253 170 aa10.2□□□□□ -0.78
SNCA-205ENST00000394991 ZFP2Q6ZN57 461 aa10.2□□□□□ -0.78
SNCA-205ENST00000394991 AKAP14Q86UN6 197 aa10.2□□□□□ -0.78
SNCA-205ENST00000394991 URGCP-MRPS24S4R325 110 aa10.2□□□□□ -0.78
SNCA-205ENST00000394991 UFSP1Q6NVU6 142 aa10.19□□□□□ -0.78
SNCA-205ENST00000394991 Q86TA4 180 aa10.19□□□□□ -0.78
SNCA-205ENST00000394991 JPT2Q9H910 190 aa10.19□□□□□ -0.78
SNCA-205ENST00000394991 PANO1I0J062 215 aa10.18□□□□□ -0.78
SNCA-205ENST00000394991 EIF5AL1Q6IS14 154 aaKnown RBP10.18□□□□□ -0.78
SNCA-205ENST00000394991 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
SNCA-205ENST00000394991 FABP5P3A8MUU1 101 aa10.17□□□□□ -0.78
SNCA-205ENST00000394991 A8MWV9 139 aa10.17□□□□□ -0.78
SNCA-205ENST00000394991 AKR1C3P42330 323 aa10.17□□□□□ -0.78
SNCA-205ENST00000394991 C14orf177Q52M58 125 aa10.17□□□□□ -0.78
SNCA-205ENST00000394991 FMC1Q96HJ9 113 aa10.17□□□□□ -0.78
SNCA-205ENST00000394991 TCEAL7Q9BRU2 100 aa10.17□□□□□ -0.78
SNCA-205ENST00000394991 Q6ZRU5 148 aa10.16□□□□□ -0.78
SNCA-205ENST00000394991 ZFP30Q9Y2G7 519 aa10.16□□□□□ -0.78
SNCA-205ENST00000394991 RAB5CP51148 216 aa10.15□□□□□ -0.78
SNCA-205ENST00000394991 SLC51BQ86UW2 128 aa10.15□□□□□ -0.78
SNCA-205ENST00000394991 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
SNCA-205ENST00000394991 CHCHD7Q9BUK0 85 aa10.15□□□□□ -0.78
SNCA-205ENST00000394991 A0A087WX48 190 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 IGKV3D-20A0A0C4DH25 116 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 SCO2A0A1W2PP80 73 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 USP17L23D6RBM5 183 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 S100A4P26447 101 aaKnown RBP10.14□□□□□ -0.79
SNCA-205ENST00000394991 CCL20P78556 96 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 ENHOQ6UWT2 76 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 GNG13Q9P2W3 67 aa10.14□□□□□ -0.79
SNCA-205ENST00000394991 TRBV6-1A0A0K0K1D8 114 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 B4DEV8 164 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 TEX46H3BTG2 121 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 M0R036 132 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 SH2D1AO60880 128 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 LTAP01374 205 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 PRSS1P07477 247 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 ASIPP42127 132 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 SULT1A2P50226 295 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 CRIP1P50238 77 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 Q0VG73 95 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 ELOBQ15370 118 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 C9orf163Q8N9P6 203 aa10.13□□□□□ -0.79
SNCA-205ENST00000394991 S100A9P06702 114 aaKnown RBP10.12□□□□□ -0.79
SNCA-205ENST00000394991 FAM162BQ5T6X4 162 aa10.12□□□□□ -0.79
SNCA-205ENST00000394991 C9orf62Q8N4C0 152 aa10.12□□□□□ -0.79
SNCA-205ENST00000394991 MANBALQ9NQG1 85 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms