RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 CRIP1P50238 77 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 GNG5P63218 68 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 MIAQ16674 131 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 FAM162BQ5T6X4 162 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 MLST8Q9BVC4 326 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 WFDC2Q14508 124 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 ODF1Q14990 250 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 ZNF726P1Q15940 193 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 NHLRC2Q8NBF2 726 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 MBD3L1Q8WWY6 194 aa4.05□□□□□ -1.76
SMARCAD1-203ENST00000394961 TRBV7-3A0A075B6L6 115 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 ZNF345Q14585 488 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 SCXQ7RTU7 201 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 DAZ4Q86SG3 579 aaKnown RBP4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 PGLYRP4Q96LB8 373 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 DAZ3Q9NR90 486 aaKnown RBP4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 KIF25-AS1Q9Y6Z4 181 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 BORCS7-ASMTA0A0B4J1R7 106 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 C9orf163Q8N9P6 203 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 HYLS1Q96M11 299 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 FAT1Q14517 4588 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 A0A1B0GUV1 79 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 C14orf178Q8N769 122 aaPredicted RBP4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 BATF3Q9NR55 127 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 NAGKQ9UJ70 344 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 PKIGQ9Y2B9 76 aa4.04□□□□□ -1.76
SMARCAD1-203ENST00000394961 TRBV6-8A0A0A6YYG3 113 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 B4DEV8 164 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 SSNA1O43805 119 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 RPL36AP83881 106 aaKnown RBP4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 IQCJQ1A5X6 159 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 RPL36ALQ969Q0 106 aaKnown RBP4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 C11orf52Q96A22 123 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 ZC2HC1AQ96GY0 325 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 SAMD10Q9BYL1 202 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 ALG5Q9Y673 324 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 TRAV8-4A0A0B4J246 113 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 RBFOX3A6NFN3 312 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 SH2D1AO60880 128 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 P01737 135 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 PRB4P10163 310 aaPredicted RBP4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 ENHOQ6UWT2 76 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 SUMO1P63165 101 aaKnown RBP4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 PRNTQ86SH4 94 aa4.03□□□□□ -1.76
SMARCAD1-203ENST00000394961 G3V3Q6 166 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 H7C423 109 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 J3QL48 77 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGHV3-30P01768 117 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGHV3-30-3P0DP02 117 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGHV3-30-5P0DP03 117 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 TPT1P13693 172 aaKnown RBP4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 LRRC37A5PQ49AS3 106 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 CYTL1Q9NRR1 136 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 TRAV1-1A0A0B4J248 108 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 UMAD1C9J7I0 102 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 ARMS2P0C7Q2 107 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 CIRBP-AS1Q8TBR5 109 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 RPS20P60866 119 aaKnown RBP4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 CACNG7P62955 275 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 DMRTA1Q5VZB9 504 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 NEXN-AS1Q8NBZ9 246 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 STOML3Q8TAV4 291 aa4.02□□□□□ -1.77
SMARCAD1-203ENST00000394961 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 CNFNQ9BYD5 112 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 GAGE12JA6NER3 117 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 GAGE1Q13065 139 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 GAGE4Q13068 117 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 GAGE5Q13069 117 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 GAGE13Q4V321 117 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 KCNIP4Q6PIL6 250 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 SMIM3Q9BZL3 60 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 URGCP-MRPS24S4R325 110 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 HMSDA8MTL9 139 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 SMR3BP02814 79 aaPredicted RBP4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 IGLC6P0CF74 106 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 PLAC8Q9NZF1 115 aa4.01□□□□□ -1.77
SMARCAD1-203ENST00000394961 NCR2O95944 276 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 S100A4P26447 101 aaKnown RBP4□□□□□ -1.77
SMARCAD1-203ENST00000394961 RPL37AP61513 92 aaKnown RBP4□□□□□ -1.77
SMARCAD1-203ENST00000394961 SDIM1Q6ZPB5 146 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 INO80EQ8NBZ0 244 aaPredicted RBP4□□□□□ -1.77
SMARCAD1-203ENST00000394961 H3BVH4 76 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 BAALCQ8WXS3 180 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 C1orf43Q9BWL3 253 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 PHLDA3Q9Y5J5 127 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 LCE2DQ5TA82 110 aaPredicted RBP4□□□□□ -1.77
SMARCAD1-203ENST00000394961 KCNRGQ8N5I3 272 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 Q9HAA7 133 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 RPH3ALQ9UNE2 315 aa4□□□□□ -1.77
SMARCAD1-203ENST00000394961 MAP1LC3B2A6NCE7 125 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 H7C1H1 209 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 PRSS1P07477 247 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 FUSP35637 526 aaKnown RBP eCLIP3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 RPL7L1Q6DKI1 246 aaKnown RBP3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 SPACA4Q8TDM5 124 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 ZNF471Q9BX82 626 aaPredicted RBP3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 MAP1LC3BQ9GZQ8 125 aa3.99□□□□□ -1.77
SMARCAD1-203ENST00000394961 MANBALQ9NQG1 85 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms