RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SCGB1A1P11684 91 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 Q6ZS46 218 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 PIP4P2Q8N4L2 257 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 EEF1AKMT3Q96AZ1 226 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 SPINK13Q1W4C9 94 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 DPH3P1Q9H4G8 78 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 PRO1854Q9UHT4 67 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 WI2-2373I1.2A0A1W2PRP0 233 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 GAGE5Q13069 117 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 GAGE6Q13070 117 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 Q6ZSV7 163 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 C11orf21Q9P2W6 132 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 A0A0J9YXV3 536 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 MBD3L4A6NDZ8 208 aaPredicted RBP6.78□□□□□ -1.32
RTN4-206ENST00000394611 MBD3L3A6NE82 208 aaPredicted RBP6.78□□□□□ -1.32
RTN4-206ENST00000394611 MBD3L5A6NJ08 208 aaPredicted RBP6.78□□□□□ -1.32
RTN4-206ENST00000394611 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 SIVA1O15304 175 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 CRIP2P52943 208 aaPredicted RBP6.78□□□□□ -1.32
RTN4-206ENST00000394611 PAX8Q06710 450 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 MBD3L2Q8NHZ7 208 aaPredicted RBP6.78□□□□□ -1.32
RTN4-206ENST00000394611 TRAV21A0A0B4J279 112 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 PPP1R17O96001 155 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 NFE4Q86UQ8 179 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 TRAV4A0A0B4J268 109 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 GAGE12JA6NER3 117 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 J3QQQ9 107 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 M0R2P5 195 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 GAGE7O76087 117 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 CTSGP08311 255 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 GAGE12FP0CL80 117 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 GAGE12GP0CL81 117 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 GAGE12IP0CL82 117 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 GAGE4Q13068 117 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
RTN4-206ENST00000394611 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 PRM2P04554 102 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 MAPK1IP1LQ8NDC0 245 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 HHLA3Q9XRX5 114 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 IFITM1P13164 125 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 TEN1Q86WV5 123 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 F8P00451 2351 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 GAGE2AQ6NT46 116 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 MUSTN1Q8IVN3 82 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 TMEM14CQ9P0S9 112 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 FLNCQ14315 2725 aa6.77□□□□□ -1.33
RTN4-206ENST00000394611 B9A039 149 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 TRBV12-3P01733 135 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 SAA4P35542 130 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 GATA4P43694 442 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 ZNF493Q6ZR52 646 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 LYPD1Q8N2G4 141 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 BAALCQ8WXS3 180 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 RNF185Q96GF1 192 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 ZNF580Q9UK33 172 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 H3BMM0 161 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 ADORA2A-AS1P86434 159 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 CDSNQ15517 529 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 CR1LQ2VPA4 569 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 UBE2WQ96B02 151 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 CARD19Q96LW7 228 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 PMVKQ15126 192 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 SLC50A1Q9BRV3 221 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 TNFRSF18Q9Y5U5 241 aa6.76□□□□□ -1.33
RTN4-206ENST00000394611 P0DMU3 169 aa6.75□□□□□ -1.33
RTN4-206ENST00000394611 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
RTN4-206ENST00000394611 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
RTN4-206ENST00000394611 TMEM30BQ3MIR4 351 aa6.75□□□□□ -1.33
RTN4-206ENST00000394611 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
RTN4-206ENST00000394611 HIST1H4AP62805 103 aaKnown RBP6.75□□□□□ -1.33
RTN4-206ENST00000394611 PDE6HQ13956 83 aa6.75□□□□□ -1.33
RTN4-206ENST00000394611 TRAV41A0A0B4J266 112 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 CRYGCP07315 174 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 TIMM21Q9BVV7 248 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 RHPN1-AS1Q9BWJ2 59 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 RAI1Q7Z5J4 1906 aaPredicted RBP6.74□□□□□ -1.33
RTN4-206ENST00000394611 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 CFC1BP0CG36 223 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 CFC1P0CG37 223 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 GATD1Q8NB37 220 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.74□□□□□ -1.33
RTN4-206ENST00000394611 IGKV2-29A2NJV5 120 aaPredicted RBP6.74□□□□□ -1.33
RTN4-206ENST00000394611 THBDP07204 575 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 ATXN8Q156A1 80 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 UNQ9165/PRO28630Q6UXU0 137 aa6.74□□□□□ -1.33
RTN4-206ENST00000394611 ITLN2Q8WWU7 325 aaPredicted RBP6.74□□□□□ -1.33
RTN4-206ENST00000394611 MUC4Q99102 2169 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 CRLF1O75462 422 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 PRR9Q5T870 116 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 NDUFA11Q86Y39 141 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 FSTL3O95633 263 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 DNAL4O96015 105 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 A0A1W2PRX2 142 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 TM2D2Q9BX73 214 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 SMAD5-AS1Q9Y6J3 95 aa6.73□□□□□ -1.33
RTN4-206ENST00000394611 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 SHISA2Q6UWI4 295 aa6.72□□□□□ -1.33
RTN4-206ENST00000394611 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms